Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_K07
(885 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0521 - 22904656-22904962,22905132-22905340,22905432-229055... 50 2e-06
03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,205... 42 9e-04
03_02_0058 - 5316112-5316418,5316497-5316705,5316773-5316859,531... 35 0.075
05_06_0213 + 26414613-26414695,26416907-26417077,26417983-264182... 32 0.53
02_02_0371 - 9513742-9514293,9514784-9514923,9515217-9515556,951... 31 0.93
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487... 31 1.6
12_02_1123 - 26250300-26250362,26251988-26252042,26252128-262522... 30 2.1
05_01_0423 + 3322335-3322385,3322618-3323532,3323636-3323878 30 2.1
01_06_0491 - 29763738-29764044,29764266-29764474,29764565-297646... 30 2.8
08_02_1207 - 25302186-25302275,25303089-25303141,25303400-253037... 29 6.6
>01_05_0521 -
22904656-22904962,22905132-22905340,22905432-22905521,
22905624-22905734,22906401-22906468,22906611-22906653
Length = 275
Score = 50.4 bits (115), Expect = 2e-06
Identities = 35/98 (35%), Positives = 50/98 (51%)
Frame = +3
Query: 150 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSK 329
MAP Y D+GKK D+ + Y K L T + GV T+ T ES VFG L ++
Sbjct: 1 MAPGLYTDIGKKTRDLLYRDYGTH-HKFTLTTCTPEGVTITAAGTRKNES--VFGELQTQ 57
Query: 330 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTL 443
+K+ LT K N+++ L T +T+ + GLK L
Sbjct: 58 --LKNKKLTVDVKANSESDLLTTVTVDEFGTPGLKSIL 93
Score = 41.9 bits (94), Expect = 7e-04
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +1
Query: 475 KTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNF 654
++GKL+ + ++ +N ++ L+ + P+V+++ V + GV FDT + F+K N
Sbjct: 101 RSGKLELQYLHEYAGINASVGLN-SNPMVNLSGVFGSKELSVGVDVAFDTATSNFTKYNA 159
Query: 655 ALGYQSGDF--ALHTN 696
AL + D +LH N
Sbjct: 160 ALSLTNSDLIASLHLN 175
>03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,
2053164-2053250,2053476-2053684,2054115-2054340,
2054473-2054510,2054657-2054714,2055363-2055662,
2055832-2055903,2055988-2056112,2056240-2056312,
2056417-2056521
Length = 1218
Score = 41.5 bits (93), Expect = 9e-04
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +1
Query: 475 KTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNF 654
K+GKL + +D A+N+ + L + P++++AA + AG FD+ A +K N
Sbjct: 814 KSGKLDLQYLHDHFALNSTIGLT-STPLIELAATIGTNELSAGAEVGFDSTSASVTKYNS 872
Query: 655 ALGYQSGDFA 684
+ Y DF+
Sbjct: 873 GICYNKHDFS 882
>03_02_0058 -
5316112-5316418,5316497-5316705,5316773-5316859,
5316945-5317055,5317536-5317643,5319082-5319149,
5319269-5319320
Length = 313
Score = 35.1 bits (77), Expect = 0.075
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 478 TGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFA 657
+GK++ + ++ + T + + PVV+ + QG G FDT KF+K + A
Sbjct: 140 SGKVEMQYFHENASFATAVGMK-PSPVVEFSGTAGAQGLAFGAEAGFDTATGKFTKYSAA 198
Query: 658 LGYQSGDF 681
+G D+
Sbjct: 199 IGVTKPDY 206
>05_06_0213 +
26414613-26414695,26416907-26417077,26417983-26418219,
26418543-26418572,26419248-26419282,26421680-26421747,
26423067-26423126,26423310-26423399,26423487-26423695,
26424083-26424383
Length = 427
Score = 32.3 bits (70), Expect = 0.53
Identities = 22/99 (22%), Positives = 39/99 (39%)
Frame = +1
Query: 475 KTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNF 654
K+ K + + + +N + L+ A P+V + V + G FDT F+K N
Sbjct: 255 KSAKAEVQYLHPHAGLNAIVGLN-ANPLVSFSGVFGTGAFAVGTDVAFDTATGDFTKYNA 313
Query: 655 ALGYQSGDFALHTNVXXGKDSAVXSTXRYLTSWTAASHE 771
L + + D + DS S ++ +A E
Sbjct: 314 GLSHTTPDLTAALLLNNKGDSLAASYYHKVSKTSAVGAE 352
>02_02_0371 -
9513742-9514293,9514784-9514923,9515217-9515556,
9515659-9515721,9515812-9515910,9516016-9516126,
9517114-9517257
Length = 482
Score = 31.5 bits (68), Expect = 0.93
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Frame = +3
Query: 39 KILVLLVGQCKDWSRAPICVEFVCEISTKFVNL*NTDMAPPYYAD-LGKKANDVFSKGYH 215
KI+V+ G C+ R + C TKF D A+ L K N+
Sbjct: 343 KIVVIFAGYCEPMKRVIASNDGFCRRVTKFFYF--DDFTTTELAEILHLKMNNPTESSLL 400
Query: 216 FGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFAVK-DYGLTFTEKWNTD--NT 386
+G FKLD E E + T+ Q ++ G L + L +N D NT
Sbjct: 401 YG-FKLDPSCSIEVVGELIARETTEQRRKQMNGGLVDTLLINARENLDLRLDFNCDDANT 459
Query: 387 LATDITIQDKIAAGLK 434
+ T IT++D + AGLK
Sbjct: 460 MIT-ITLED-LEAGLK 473
>03_01_0005 +
46370-46454,46962-47071,47381-47545,47672-48463,
48730-48840,48935-49195,49415-49638,49735-49855,
50673-51214,51302-51488,51569-51895,52047-52197,
52287-52424,52918-53013,53276-53357,54411-54679,
54769-54882,55050-55288,55488-55715,55799-55951,
56479-56616,57061-57188,57598-57718,58142-58306,
59486-59633,59772-59898,60025-60118,60119-60268,
60577-60624,60712-60819,61040-61114,61225-61275,
61341-61487,61584-61714,61944-62031,62204-62266,
62336-62582,62830-62981,63056-63126,63214-63370,
63520-63687
Length = 2323
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3
Query: 637 TLLFVYQTGCVHQPANPGSLVLL 569
TLLFVYQTG P PG L+LL
Sbjct: 693 TLLFVYQTGEDPPPPAPGGLLLL 715
>12_02_1123 -
26250300-26250362,26251988-26252042,26252128-26252224,
26252364-26253048,26253354-26253721,26253931-26254074,
26254925-26255276
Length = 587
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 159 PYYADLGKKANDVFSKGYHFGVFKLDLKTKS--ESGVEFTSGITSNQESGKVFGSLSSKF 332
P Y G + D+ SK +H LDL S + G++F SG+ S + V L+ +
Sbjct: 261 PQYVH-GTQLPDLESKFFH-----LDLMHPSVYKVGLQFLSGVISGGNACCVAMLLAFRE 314
Query: 333 AVKDYGLTFTEKWNTDNT 386
A+KDY T+ N D T
Sbjct: 315 AIKDYSTPSTKTLNRDLT 332
>05_01_0423 + 3322335-3322385,3322618-3323532,3323636-3323878
Length = 402
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = +1
Query: 595 LAGVHTQFDTQKAKFSKNNFALGYQSGD-FAL----HTNVXXGKDSAVXSTXRYLTSWTA 759
+ V+TQ D K ++ + YQ D F + HT + GK V S +L W A
Sbjct: 174 VVAVNTQVDLMLLKLNREDIYYSYQDADNFIICPEDHTRIKLGKSPPVESENVFLQGWPA 233
>01_06_0491 -
29763738-29764044,29764266-29764474,29764565-29764654,
29764819-29764905,29765598-29765733,29766036-29766186,
29766334-29766502
Length = 382
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Frame = +1
Query: 481 GKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFAL 660
GK + + +D ++ + L + P+V+++ V + G DT F+K + L
Sbjct: 210 GKAELQYLHDYAGISLGVGLT-SKPLVNLSGVFGNKSVAVGADVAVDTSTGDFTKYDAGL 268
Query: 661 GYQSGDFALHTNVXXGKDSAVXSTXRYLT--SWTAASHE 771
+ D A + DS S + S TAA E
Sbjct: 269 TINNSDLAADLTLNNKGDSLTASYYHLVNKESGTAAGAE 307
>08_02_1207 -
25302186-25302275,25303089-25303141,25303400-25303788,
25303968-25304338,25304362-25304502
Length = 347
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 649 CSWRTLLFVYQTGCVHQPANPGSLVLLQRLQLD 551
CSW + + TG V P+ G L LLQ +QL+
Sbjct: 34 CSWDSGIICSDTGHVPIPSALGDLPLLQTIQLE 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,526,539
Number of Sequences: 37544
Number of extensions: 424503
Number of successful extensions: 1084
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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