Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_K07
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical pr...   108   5e-24
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    32   0.47 
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    32   0.47 
AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical ...    29   4.4  
AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical ...    29   4.4  
U40938-6|AAA81698.1|  655|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical
           protein R05G6.7 protein.
          Length = 283

 Score =  108 bits (260), Expect = 5e-24
 Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
 Frame = +3

Query: 150 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESG--VEFTSGITSNQESGKVFGSLS 323
           MAPP +ADLGK A D+F+KGY+FG  K+D  T++     VEF S  + N  SGK+ G+L 
Sbjct: 1   MAPPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLD 60

Query: 324 SKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLXRHFCP 461
            K+ +  YG+T TEKWNT+N L T I + ++   GLKVTL   + P
Sbjct: 61  VKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAP 106



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 28/94 (29%), Positives = 46/94 (48%)
 Frame = +1

Query: 433 KSPLXGTFAPQTGTKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHT 612
           K  L   +AP  G ++GK+K  +   T  V  ++ +  A PV++ A V +  GWL G   
Sbjct: 97  KVTLDSLYAPHAGKRSGKVKLDWALPTARVTADVGVTSA-PVINAAGVFSRDGWLIGAAA 155

Query: 613 QFDTQKAKFSKNNFALGYQSGDFALHTNVXXGKD 714
            FD+   K +  + A G+ +  + LH+ V    D
Sbjct: 156 TFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTD 189


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
            T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 243  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 398
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
            protein T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 243  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 398
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1b protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 261 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 401
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1a protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 261 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 401
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>U40938-6|AAA81698.1|  655|Caenorhabditis elegans Hypothetical
           protein D1009.1a protein.
          Length = 655

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
 Frame = +1

Query: 34  SLRFWSCWLGSAKIGRARQFAWNSSVK*VP---SL*IYKTQTWLPHIMLTLERRPMMSSA 204
           S+ F++ WLG +KIG    F  NS++K  P   S+ + K ++ + +I L     PM  +A
Sbjct: 142 SIDFFAIWLGLSKIGVVSAFI-NSNLKLEPLAHSINVSKCKSCITNINLL----PMFKAA 196

Query: 205 RAITLV 222
           R   L+
Sbjct: 197 REKNLI 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,849,837
Number of Sequences: 27780
Number of extensions: 356667
Number of successful extensions: 915
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)