Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_J18
         (937 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    31   0.90 
AC006633-3|AAK68375.1|  227|Caenorhabditis elegans Hypothetical ...    31   0.90 
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p...    29   3.6  
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p...    29   3.6  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    29   6.3  
Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical ...    28   8.3  
AF025472-3|AAB71075.2|  843|Caenorhabditis elegans Hypothetical ...    28   8.3  

>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
            ZC84.1 protein.
          Length = 1556

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 24/85 (28%), Positives = 35/85 (41%)
 Frame = +3

Query: 132  GNSEDDYSIEQEDPCRREGGLCTVAQDCPSDIRAKTGLCPKQQKDGIECCYGVSVKETRC 311
            G+  +D   E   P +  GG C     C S+     GLC  + K G E C  V     +C
Sbjct: 1193 GSVCEDAKCECRPPLKAVGGFCQEEIQCSSNQVLHNGLCHNKAKLG-EACLTV----RQC 1247

Query: 312  RKHGGECFSKGYCSQSLIYEEASDC 386
            +++ G       C +  I E+A  C
Sbjct: 1248 QENSGCIEGSCECKKGFI-EKAGKC 1271


>AC006633-3|AAK68375.1|  227|Caenorhabditis elegans Hypothetical
           protein F35B3.4 protein.
          Length = 227

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +3

Query: 213 CPSDIRAKTGLCPKQQKDGIECCYGVSVKETRCRKHGGECFSKGYCSQ 356
           CP    A    C  Q +D  +CCY  SV  T     G +CF+  +C Q
Sbjct: 113 CPMQAAADIQYCAAQGQDHTDCCYRNSVGTTLA---GNKCFT--FCDQ 155


>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
             K07E12.1a protein.
          Length = 13100

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +3

Query: 210   DCPSDIRAKTGLCPKQ--QKDGIECCYGVSVKETRCRKHGGECFSKGYCSQSLIYEEASD 383
             +CP  ++A  G CPK    KDG   CY +      C  + G+C S+G  +    Y  A  
Sbjct: 12963 ECPCKVKAHGGRCPKGYIAKDG--QCYDID----ECETNNGQC-SEGCVNTPGSYYCA-- 13013

Query: 384   CPEG 395
             CP G
Sbjct: 13014 CPHG 13017


>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
          Length = 13100

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +3

Query: 210   DCPSDIRAKTGLCPKQ--QKDGIECCYGVSVKETRCRKHGGECFSKGYCSQSLIYEEASD 383
             +CP  ++A  G CPK    KDG   CY +      C  + G+C S+G  +    Y  A  
Sbjct: 12963 ECPCKVKAHGGRCPKGYIAKDG--QCYDID----ECETNNGQC-SEGCVNTPGSYYCA-- 13013

Query: 384   CPEG 395
             CP G
Sbjct: 13014 CPHG 13017


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
           protein C08G9.2 protein.
          Length = 2224

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
 Frame = +3

Query: 192 LCTVAQDCPSDIRAKTGLCPKQQKDGIECCYGVSVKETRCRKHGGECFSKGYCSQSLIYE 371
           LC++ +DCP       G C K   +G+  C       TR  +   +   K  C   LIY 
Sbjct: 400 LCSIDKDCPE------GTCSKIGYNGLGFCCSGPASSTRDGRCPSQAADKLKC---LIYP 450

Query: 372 EAS-----DCPEGNDCC 407
           + S     +C E   CC
Sbjct: 451 DNSCHSDHECSEDEKCC 467


>Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical
           protein T22H2.6b protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 279 CYGVSVKET--RCRKHGGECFSKGYCSQSLIYEEASDCPEGNDCCIL 413
           C G   K    + +K   +   +   ++ +  ++AS CP+G+ CC+L
Sbjct: 149 CIGADEKHVPMKKKKPARKTVERNQFNEVVCPDKASKCPDGSTCCLL 195


>Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical
           protein T22H2.6a protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 279 CYGVSVKET--RCRKHGGECFSKGYCSQSLIYEEASDCPEGNDCCIL 413
           C G   K    + +K   +   +   ++ +  ++AS CP+G+ CC+L
Sbjct: 149 CIGADEKHVPMKKKKPARKTVERNQFNEVVCPDKASKCPDGSTCCLL 195


>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +3

Query: 255 QQKDGIECCYGVSVKETRCRKH--GGECFSKGYCSQSLIYEEASDCPEGNDCCILV 416
           Q+K+G +   G  + E    K   G E   +GY ++ LI E + D P G   CI+V
Sbjct: 98  QKKEGDQLSEGDLLCEIETDKATMGFETPEEGYLAKILIQEGSKDVPIGKLLCIIV 153


>AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical
           protein F39C12.4 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +3

Query: 273 ECCYGVSVKETRCR--KHGGECFSKGYC 350
           EC Y     E  C+   H G C  KGYC
Sbjct: 64  ECSYSAVCPELFCKIGHHPGYCMKKGYC 91


>AF025472-3|AAB71075.2|  843|Caenorhabditis elegans Hypothetical
           protein ZK250.6 protein.
          Length = 843

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 213 NPEPQYTNHLPCGTDPLVRWNN 148
           N +  YTN+  CG D ++RW +
Sbjct: 483 NTKHTYTNNTDCGWDKIIRWKD 504


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,467,434
Number of Sequences: 27780
Number of extensions: 237008
Number of successful extensions: 639
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)