Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_J17
         (1003 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       45   1e-04
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.9  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 30/86 (34%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
 Frame = -2

Query: 687 PXWEXPXXIWPXXXPPA-----LXXXFSXXXXSPVXPXFXXXPFXXLXKNXXPFXPPLXX 523
           P +  P   WP   PPA     L   FS     P  P     PF  L     P  PPL  
Sbjct: 258 PAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPP--LPHFPPLP- 314

Query: 522 GGFXXKKPPXPXPPPXXXQXFPGXFP 445
             F    PP P PPP     FP  FP
Sbjct: 315 -SFYPSPPPPPPPPPPPPPSFPWPFP 339


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 23/72 (31%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
 Frame = -2

Query: 657 PXXXPPALXXXFSXXXXSPVXPXFXXXPFXXLXKNXX-PFXPPLXXGGFXXKKPPXPXPP 481
           P   PP      S    +P  P     P     +N   P  PPL  G    KK P P PP
Sbjct: 712 PPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTG----KKAPAPPPP 767

Query: 480 PXXXQXFPGXFP 445
           P      PG  P
Sbjct: 768 PPQAPKPPGTVP 779


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,246,775
Number of Sequences: 37544
Number of extensions: 200584
Number of successful extensions: 697
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2940399740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)