Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_J12
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 45 7e-05
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 45 7e-05
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 45 7e-05
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.002
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 36 0.031
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 36 0.031
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.064
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.071
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 34 0.16
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 34 0.16
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 33 0.38
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 33 0.38
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.50
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.50
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 32 0.66
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 31 0.87
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 31 1.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.1
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.5
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 3.5
U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family pr... 29 4.6
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 29 4.6
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 4.6
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 6.1
U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (gr... 29 6.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 6.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 6.1
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 6.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 6.1
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 8.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 8.1
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 8.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 8.1
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 28 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 45.2 bits (102), Expect = 7e-05
Identities = 24/68 (35%), Positives = 24/68 (35%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPP 535
PPPP GG G PP GG GG P GG PP PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 536 PPRXXGXK 559
PP G K
Sbjct: 774 PPPPGGFK 781
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/95 (31%), Positives = 30/95 (31%)
Frame = +2
Query: 473 PXXGGGXPPXXKKXXXGGXPPPPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFF 652
P GG PP GG PPPP G P P G P PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-- 765
Query: 653 FXXGXGGGGGTSXXQXTPPPPXGGXGGXFFSPPXP 757
GG PPPP GG G PP P
Sbjct: 766 -----GG-----CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/90 (28%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Frame = +1
Query: 457 GXGGXPPXGGGXXPPXKKKXXWGGXPPPXKXXXKXPFXXXXXAXPP--GXPXXXRGKXKX 630
G PP GG PP GG PPP P PP G P G
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Query: 631 PXXPPFFFXXXRXXXXXXFPXTKXPPPPXG 720
P P F PPPP G
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/64 (37%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +2
Query: 356 PPPPPK--KXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGX 529
PPPPP GG G PP GG GG P PP K GG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK---GGP 784
Query: 530 PPPP 541
PPPP
Sbjct: 785 PPPP 788
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -2
Query: 552 PXFLGGGGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXPPP 385
P GG PP G PPP G PP PP GG P PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 31.9 bits (69), Expect = 0.66
Identities = 23/57 (40%), Positives = 23/57 (40%)
Frame = -2
Query: 534 GGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXPPPXXXFLGG 364
GG PP GG PP G PPP PP GG P PPP F GG
Sbjct: 740 GGPPPPP---PPGGLPPISGGPPPP-------PPPPGGCPP---PPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 45.2 bits (102), Expect = 7e-05
Identities = 24/68 (35%), Positives = 24/68 (35%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPP 535
PPPP GG G PP GG GG P GG PP PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 536 PPRXXGXK 559
PP G K
Sbjct: 774 PPPPGGFK 781
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/95 (31%), Positives = 30/95 (31%)
Frame = +2
Query: 473 PXXGGGXPPXXKKXXXGGXPPPPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFF 652
P GG PP GG PPPP G P P G P PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-- 765
Query: 653 FXXGXGGGGGTSXXQXTPPPPXGGXGGXFFSPPXP 757
GG PPPP GG G PP P
Sbjct: 766 -----GG-----CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/90 (28%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Frame = +1
Query: 457 GXGGXPPXGGGXXPPXKKKXXWGGXPPPXKXXXKXPFXXXXXAXPP--GXPXXXRGKXKX 630
G PP GG PP GG PPP P PP G P G
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Query: 631 PXXPPFFFXXXRXXXXXXFPXTKXPPPPXG 720
P P F PPPP G
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/64 (37%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +2
Query: 356 PPPPPK--KXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGX 529
PPPPP GG G PP GG GG P PP K GG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK---GGP 784
Query: 530 PPPP 541
PPPP
Sbjct: 785 PPPP 788
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -2
Query: 552 PXFLGGGGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXPPP 385
P GG PP G PPP G PP PP GG P PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 31.9 bits (69), Expect = 0.66
Identities = 23/57 (40%), Positives = 23/57 (40%)
Frame = -2
Query: 534 GGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXPPPXXXFLGG 364
GG PP GG PP G PPP PP GG P PPP F GG
Sbjct: 740 GGPPPPP---PPGGLPPISGGPPPP-------PPPPGGCPP---PPPPPPPGGFKGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 45.2 bits (102), Expect = 7e-05
Identities = 24/68 (35%), Positives = 24/68 (35%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPP 535
PPPP GG G PP GG GG P GG PP PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 536 PPRXXGXK 559
PP G K
Sbjct: 357 PPPPGGFK 364
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/95 (31%), Positives = 30/95 (31%)
Frame = +2
Query: 473 PXXGGGXPPXXKKXXXGGXPPPPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFF 652
P GG PP GG PPPP G P P G P PP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-- 348
Query: 653 FXXGXGGGGGTSXXQXTPPPPXGGXGGXFFSPPXP 757
GG PPPP GG G PP P
Sbjct: 349 -----GG-----CPPPPPPPPPGGFKGGPPPPPPP 373
Score = 38.7 bits (86), Expect = 0.006
Identities = 26/90 (28%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Frame = +1
Query: 457 GXGGXPPXGGGXXPPXKKKXXWGGXPPPXKXXXKXPFXXXXXAXPP--GXPXXXRGKXKX 630
G PP GG PP GG PPP P PP G P G
Sbjct: 285 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Query: 631 PXXPPFFFXXXRXXXXXXFPXTKXPPPPXG 720
P P F PPPP G
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/64 (37%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +2
Query: 356 PPPPPK--KXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGX 529
PPPPP GG G PP GG GG P PP K GG
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK---GGP 367
Query: 530 PPPP 541
PPPP
Sbjct: 368 PPPP 371
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -2
Query: 552 PXFLGGGGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXPPP 385
P GG PP G PPP G PP PP GG P PPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 31.9 bits (69), Expect = 0.66
Identities = 23/57 (40%), Positives = 23/57 (40%)
Frame = -2
Query: 534 GGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXPPPXXXFLGG 364
GG PP GG PP G PPP PP GG P PPP F GG
Sbjct: 323 GGPPPPP---PPGGLPPISGGPPPP-------PPPPGGCPP---PPPPPPPGGFKGG 366
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 43.6 bits (98), Expect = 2e-04
Identities = 42/172 (24%), Positives = 57/172 (33%), Gaps = 4/172 (2%)
Frame = +1
Query: 322 PXQRKXXXKKXXPPPPQKXXXGGGXPXKKXXXXXPXQXGXXKEKXGXGGXPPXGGGXXPP 501
P Q++ + PPP P ++ P Q G G P GG PP
Sbjct: 256 PPQQQQQQFQAPPPPMASHSSISSTPVQQQGFAPPQQFGGPPPS----GPPSEYGGYAPP 311
Query: 502 XKKKXXWGGXPPPXKXXXKXPFXXXXXAXPPGXPXXXRGKXKXPXXPPFFFXXXRXXXXX 681
+++ +G PP + + F P G P +G P F +
Sbjct: 312 QQQQQQFGA--PPPQGAPQQGFGAPPQGPPQGGP--PQGSFGAPPPQQFHAPSPQSFGGP 367
Query: 682 XFPXTKXP----PPPXGGXGGXFFFTPXPXPXXKKKXXXXXGXGGGXXPPPP 825
P + P PPP G G F P P + G GG PPPP
Sbjct: 368 PPPVSSAPGNFAPPPQSGPPGA--FAPPPSAFGAPQ---GPGGPGGYGPPPP 414
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Frame = -2
Query: 645 GGXXGXFXFSPXXXGXPXGXGXXXXXKXXFXPXFLGG-GGXPPXXFFFXXGGXPPPXXGX 469
GG G P G P G F P GG G P F G PPP
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAG 463
Query: 468 PPPXXFFFXXPPLXG 424
P F P G
Sbjct: 464 APGGNPFARGPSATG 478
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.9 bits (89), Expect = 0.002
Identities = 38/133 (28%), Positives = 40/133 (30%), Gaps = 8/133 (6%)
Frame = +2
Query: 356 PPPPPKKXXX----GGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXG 523
PPPPPK G G PP G G P GG PP +
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR----A 294
Query: 524 GXPPPPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFFFXXGXGGGGGT-SXXQX 700
G PPPP P G P G P PP T S
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS--PPPPPRQKRQAPERSPPTGSPPTG 352
Query: 701 TPP---PPXGGXG 730
+PP PP GG G
Sbjct: 353 SPPTGRPPRGGPG 365
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/56 (37%), Positives = 21/56 (37%)
Frame = -2
Query: 552 PXFLGGGGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXPPP 385
P G G PP G PPP G PPP PP GG P PPP
Sbjct: 247 PPLAGSGSPPPPP---AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPP 535
PPPPP G PP G G P G PP GG PP
Sbjct: 237 PPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP----PPAGGSPP 290
Query: 536 PPR 544
PPR
Sbjct: 291 PPR 293
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/104 (24%), Positives = 28/104 (26%), Gaps = 1/104 (0%)
Frame = +2
Query: 521 GGXPPPPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFFFXXGXGGGGGTSXXQ- 697
G PPPP G P P P PP GG +
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 698 XTPPPPXGGXGGXFFSPPXPXXXXKKXXXXXXXGGAXXXXPPXR 829
+PPPP G SPP + G PP R
Sbjct: 295 GSPPPPPPPRG----SPPTGSLPPPQAGGSPPPAGTGSPPPPPR 334
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.9 bits (89), Expect = 0.002
Identities = 38/133 (28%), Positives = 40/133 (30%), Gaps = 8/133 (6%)
Frame = +2
Query: 356 PPPPPKKXXX----GGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXG 523
PPPPPK G G PP G G P GG PP +
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR----A 315
Query: 524 GXPPPPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFFFXXGXGGGGGT-SXXQX 700
G PPPP P G P G P PP T S
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS--PPPPPRQKRQAPERSPPTGSPPTG 373
Query: 701 TPP---PPXGGXG 730
+PP PP GG G
Sbjct: 374 SPPTGRPPRGGPG 386
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/56 (37%), Positives = 21/56 (37%)
Frame = -2
Query: 552 PXFLGGGGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXPPP 385
P G G PP G PPP G PPP PP GG P PPP
Sbjct: 268 PPLAGSGSPPPPP---AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPP 535
PPPPP G PP G G P G PP GG PP
Sbjct: 258 PPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP----PPAGGSPP 311
Query: 536 PPR 544
PPR
Sbjct: 312 PPR 314
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/104 (24%), Positives = 28/104 (26%), Gaps = 1/104 (0%)
Frame = +2
Query: 521 GGXPPPPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFFFXXGXGGGGGTSXXQ- 697
G PPPP G P P P PP GG +
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 698 XTPPPPXGGXGGXFFSPPXPXXXXKKXXXXXXXGGAXXXXPPXR 829
+PPPP G SPP + G PP R
Sbjct: 316 GSPPPPPPPRG----SPPTGSLPPPQAGGSPPPAGTGSPPPPPR 355
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.002
Identities = 38/133 (28%), Positives = 40/133 (30%), Gaps = 8/133 (6%)
Frame = +2
Query: 356 PPPPPKKXXX----GGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXG 523
PPPPPK G G PP G G P GG PP +
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR----A 300
Query: 524 GXPPPPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFFFXXGXGGGGGT-SXXQX 700
G PPPP P G P G P PP T S
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS--PPPPPRQKRQAPERSPPTGSPPTG 358
Query: 701 TPP---PPXGGXG 730
+PP PP GG G
Sbjct: 359 SPPTGRPPRGGPG 371
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/56 (37%), Positives = 21/56 (37%)
Frame = -2
Query: 552 PXFLGGGGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXPPP 385
P G G PP G PPP G PPP PP GG P PPP
Sbjct: 253 PPLAGSGSPPPPP---AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPP 535
PPPPP G PP G G P G PP GG PP
Sbjct: 243 PPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP----PPAGGSPP 296
Query: 536 PPR 544
PPR
Sbjct: 297 PPR 299
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/104 (24%), Positives = 28/104 (26%), Gaps = 1/104 (0%)
Frame = +2
Query: 521 GGXPPPPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFFFXXGXGGGGGTSXXQ- 697
G PPPP G P P P PP GG +
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 698 XTPPPPXGGXGGXFFSPPXPXXXXKKXXXXXXXGGAXXXXPPXR 829
+PPPP G SPP + G PP R
Sbjct: 301 GSPPPPPPPRG----SPPTGSLPPPQAGGSPPPAGTGSPPPPPR 340
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 36.3 bits (80), Expect = 0.031
Identities = 27/107 (25%), Positives = 37/107 (34%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPP 535
PPPPP+ GG PP ++++ P G PP ++ G PP
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPG---PPPPQQQRGYGYPP 736
Query: 536 PPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFFFXXGXGGG 676
PP+ G P P + + P PP G GG
Sbjct: 737 PPQ-PGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGGDGG 782
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 472 PPXGG-GXXPPXKKKXXWGGXPPP 540
PP GG G PP + + +GG PPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = -2
Query: 531 GXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXP--PPXXXFLGGGG 358
G PP G PPP G P + PP G P P PP GG G
Sbjct: 722 GPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGGDG 781
Query: 357 G 355
G
Sbjct: 782 G 782
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 36.3 bits (80), Expect = 0.031
Identities = 27/107 (25%), Positives = 37/107 (34%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPP 535
PPPPP+ GG PP ++++ P G PP ++ G PP
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPG---PPPPQQQRGYGYPP 736
Query: 536 PPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFFFXXGXGGG 676
PP+ G P P + + P PP G GG
Sbjct: 737 PPQ-PGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGGDGG 782
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 472 PPXGG-GXXPPXKKKXXWGGXPPP 540
PP GG G PP + + +GG PPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = -2
Query: 531 GXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXP--PPXXXFLGGGG 358
G PP G PPP G P + PP G P P PP GG G
Sbjct: 722 GPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGGDG 781
Query: 357 G 355
G
Sbjct: 782 G 782
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect(2) = 0.064
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPP 535
PPPPP G G G GG GGG GGG PP
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPP 113
Query: 536 PPRXXG 553
PP G
Sbjct: 114 PPPACG 119
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 662 GXGGGGGTSXXQXTPPPPXGGXGG 733
G GGGGG PPPP GG
Sbjct: 41 GCGGGGGCGGGCAPPPPPPACGGG 64
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 662 GXGGGGGTSXXQXTPPPPXGGXGG 733
G GGGGG PPPP GG
Sbjct: 98 GCGGGGGCGGGCAPPPPPPACGGG 121
Score = 21.8 bits (44), Expect(2) = 0.064
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 632 PXXPPFFFXXGXGGGGG 682
P PP G GGGGG
Sbjct: 111 PPPPPPACGGGCGGGGG 127
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.1 bits (77), Expect = 0.071
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = -2
Query: 558 FXPXFLGGGGXPPXXFFFXXGGXPPPXX--GXPPPXXFFFXXPP 433
F P G GG PP F G PPP G PPP F PP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPP 116
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 472 PPXGGGXXPPXKKKXXWGGXPPPXKXXXKXPFXXXXXAXPPGXPXXXRGKXKXPXXP 642
PP G G PP G PPP P A PP P G P P
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 536 GGXPPXXXFFFXGGXXPPPXGGXPPXPXFSFXXP 435
GG PP F G PPP G P P F P
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP 114
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = +1
Query: 361 PPPQKXXXGGGXPXKKXXXXXPXQXGXXKEKXGXGGXPP----XGGGXXPPXKKKXXWGG 528
PP G P P G G GG PP GG PP GG
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPP---PPMMGG 103
Query: 529 XPPP 540
PPP
Sbjct: 104 IPPP 107
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -2
Query: 552 PXFLGGGGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPL--XGGXXPXFFXWXPPPXX 379
P F+G G PP PPP G PP F P+ GG P FF PPP
Sbjct: 309 PHFMGRGMPPPFM-------PPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFF---PPPPP 358
Query: 378 XFL 370
F+
Sbjct: 359 HFM 361
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Frame = -2
Query: 525 PPXXFFFXXGGXPPPXXGXPPPXXFFFXXPP---LXGGXXPXFFXWXPPPXXXFLG 367
PP PPP PPP F PP + G P F PPP +G
Sbjct: 278 PPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFM---PPPPHFGMG 330
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -2
Query: 552 PXFLGGGGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPL--XGGXXPXFFXWXPPPXX 379
P F+G G PP PPP G PP F P+ GG P FF PPP
Sbjct: 309 PHFMGRGMPPPFM-------PPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFF---PPPPP 358
Query: 378 XFL 370
F+
Sbjct: 359 HFM 361
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Frame = -2
Query: 525 PPXXFFFXXGGXPPPXXGXPPPXXFFFXXPP---LXGGXXPXFFXWXPPPXXXFLG 367
PP PPP PPP F PP + G P F PPP +G
Sbjct: 278 PPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFM---PPPPHFGMG 330
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 668 GGGGGTSXXQXTPPPPXGGXGGXFFSPPXP 757
G GGG+S PPP GG GG F PP P
Sbjct: 652 GSGGGSSMPMPVPPP--GGLGG-FMPPPPP 678
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 668 GGGGGTSXXQXTPPPPXGGXGGXFFSPPXP 757
G GGG+S PPP GG GG F PP P
Sbjct: 652 GSGGGSSMPMPVPPP--GGLGG-FMPPPPP 678
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.50
Identities = 39/156 (25%), Positives = 46/156 (29%)
Frame = +1
Query: 358 PPPPQKXXXGGGXPXKKXXXXXPXQXGXXKEKXGXGGXPPXGGGXXPPXKKKXXWGGXPP 537
PPPP K G G P P G ++ G G PP K PP
Sbjct: 96 PPPPPK---GTGTPP-------PPPTGEPQDLSGEGN-----ASRRPPPPPKGTGSPPPP 140
Query: 538 PXKXXXKXPFXXXXXAXPPGXPXXXRGKXKXPXXPPFFFXXXRXXXXXXFPXTKXPPPPX 717
P PP P +G P P ++ PPPP
Sbjct: 141 PTGEPQDLSGEGNASRRPPPPP---KGTGSPPPPPT----GEPQDLSTEGNASRRPPPPP 193
Query: 718 GGXGGXFFFTPXPXPXXKKKXXXXXGXGGGXXPPPP 825
G G TP P P + + G PPPP
Sbjct: 194 KGTG-----TPPPPPTGEPQDLSAEGYASRRPPPPP 224
Score = 31.1 bits (67), Expect = 1.1
Identities = 37/156 (23%), Positives = 46/156 (29%)
Frame = +1
Query: 358 PPPPQKXXXGGGXPXKKXXXXXPXQXGXXKEKXGXGGXPPXGGGXXPPXKKKXXWGGXPP 537
PPPP K G G P P G ++ G G PP K PP
Sbjct: 127 PPPPPK---GTGSPP-------PPPTGEPQDLSGEGN-----ASRRPPPPPKGTGSPPPP 171
Query: 538 PXKXXXKXPFXXXXXAXPPGXPXXXRGKXKXPXXPPFFFXXXRXXXXXXFPXTKXPPPPX 717
P PP P +G P P + + + PPPP
Sbjct: 172 PTGEPQDLSTEGNASRRPPPPP---KGTGTPPPPPT---GEPQDLSAEGYASRRPPPPPK 225
Query: 718 GGXGGXFFFTPXPXPXXKKKXXXXXGXGGGXXPPPP 825
G +P P P + + G PPPP
Sbjct: 226 GTG------SPTPPPTGEPQDLSGEGNASRRPPPPP 255
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 694 TKXPPPPXGGXGGXFFFTPXPXPXXKKKXXXXXGXGGGXXPPPP 825
++ PPPP G G TP P P + + G PPPP
Sbjct: 30 SRRPPPPPKGTG-----TPPPPPTGEPQDLSGEGNASRRPPPPP 68
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 694 TKXPPPPXGGXGGXFFFTPXPXPXXKKKXXXXXGXGGGXXPPPP 825
++ PPPP G G TP P P + + G PPPP
Sbjct: 93 SRRPPPPPKGTG-----TPPPPPTGEPQDLSGEGNASRRPPPPP 131
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +1
Query: 694 TKXPPPPXGGXGGXFFFTPXPXPXXKKKXXXXXGXGGGXXPPPP 825
++ PPPP G G +P P P + + G PPPP
Sbjct: 248 SRRPPPPPKGTG-----SPPPPPTGEPQDLSGEGNASRRPPPPP 286
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +1
Query: 694 TKXPPPPXGGXGGXFFFTPXPXPXXKKKXXXXXGXGGGXXPPPP 825
++ PPPP G G TP P P + + PPPP
Sbjct: 61 SRRPPPPPKGTG-----TPPPPPTGEPQDLSAEEGNASRRPPPP 99
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = -2
Query: 537 GGGXPPXXFFFXXGGXPPPXXGXPPPXXFFFXXPPLXGGXXPXFFXWXPP 388
GG PP G PPP G PP PP+ GG P F PP
Sbjct: 1466 GGPPPPRGMNSPMRGMPPPMRGGGPPMR---GGPPMRGG--PPMFRGGPP 1510
Score = 30.3 bits (65), Expect = 2.0
Identities = 31/123 (25%), Positives = 35/123 (28%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPP 535
PPPP G G PP GG + GG P GG P + G P
Sbjct: 1468 PPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMR----GGPPMFRGGPPGPGR-----GMPS 1518
Query: 536 PPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXXPPFFFXXGXGGGGGTSXXQXTPPPP 715
P P P PP GG + + PPPP
Sbjct: 1519 PMMRGSSMRGGFPQRGGGPGMGPSQYYHDSPQNRGPP--MGGLPPPHGGMNGWRGGPPPP 1576
Query: 716 XGG 724
GG
Sbjct: 1577 RGG 1579
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +2
Query: 362 PPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGGXPPXXKKXXXGGXPPP 538
PPP GG + G PP G + G P G PP GG PPP
Sbjct: 1560 PPPH-----GGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 531 GXPPXXFFFXXGGXPPPXXGXPPP 460
G PP G PPP G PPP
Sbjct: 1590 GGPPPRLGMPPPGPPPPNGGPPPP 1613
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +2
Query: 653 FXXGXGGGGGTSXXQXTPPPPXG--GXGGXFFSPP 751
F GGGGG PPP G G GG + +PP
Sbjct: 17 FLFPSGGGGGCGCAPPPPPPACGCGGGGGGYAAPP 51
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 31.5 bits (68), Expect = 0.87
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 662 GXGGGGGTSXXQXTPPPPXGGXG 730
G GG GG S PPPP GG G
Sbjct: 200 GSGGSGGGSGRFPPPPPPYGGGG 222
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 761 GXGXGVKKXXPPXPPXGGGG 702
G G G + PP PP GGGG
Sbjct: 203 GSGGGSGRFPPPPPPYGGGG 222
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2
Query: 647 FFFXXGXGGGGGTSXXQXTPPPPXGGXGGXFFSPP 751
F F G GGG G + PPPP G GG PP
Sbjct: 17 FLFPSGGGGGCGCAP----PPPPACGCGGGAAPPP 47
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.1
Identities = 28/92 (30%), Positives = 29/92 (31%), Gaps = 2/92 (2%)
Frame = +2
Query: 488 GXPPXXKKXXXGGXPPPPRXXGXKXXFXXXXX--PXPXGXPXXXGEXKKXPXXPPFFFXX 661
G PP PPPP G P P G P + K P PP F
Sbjct: 693 GLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPP--PPMF-QQ 749
Query: 662 GXGGGGGTSXXQXTPPPPXGGXGGXFFSPPXP 757
G G PPPP G G S P P
Sbjct: 750 GFNAGA--------PPPPFGRGAGPMSSFPPP 773
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 671 GGGGTSXXQXTPPPPXGGXGGXFFSPP 751
GGGG Q P P GG GG PP
Sbjct: 250 GGGGNQNRQQVPTNPMGGGGGYPQPPP 276
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.7
Identities = 27/110 (24%), Positives = 30/110 (27%)
Frame = +1
Query: 496 PPXKKKXXWGGXPPPXKXXXKXPFXXXXXAXPPGXPXXXRGKXKXPXXPPFFFXXXRXXX 675
PP W PPP + P PP P G PP
Sbjct: 288 PPPPSSGMW--PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP------PPPP 339
Query: 676 XXXFPXTKXPPPPXGGXGGXFFFTPXPXPXXKKKXXXXXGXGGGXXPPPP 825
+P PPPP P P P + G G PPPP
Sbjct: 340 GMRYPGGMPPPPPPRYPSAGPGMYPPPPP--SRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.7
Identities = 27/110 (24%), Positives = 30/110 (27%)
Frame = +1
Query: 496 PPXKKKXXWGGXPPPXKXXXKXPFXXXXXAXPPGXPXXXRGKXKXPXXPPFFFXXXRXXX 675
PP W PPP + P PP P G PP
Sbjct: 298 PPPPSSGMW--PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP------PPPP 349
Query: 676 XXXFPXTKXPPPPXGGXGGXFFFTPXPXPXXKKKXXXXXGXGGGXXPPPP 825
+P PPPP P P P + G G PPPP
Sbjct: 350 GMRYPGGMPPPPPPRYPSAGPGMYPPPPP--SRPPAPPSGHGMIPPPPPP 397
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 694 TKXPPPPXG-GXGGXFFFTPXPXPXXKKKXXXXXGXGGGXXPPPP 825
T PPPP G GG P P K GG PPPP
Sbjct: 537 TPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPP 581
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 641 PPFFFXXGXGGGGGTSXXQXTP-PPPXGGXGGXFFSPPXP 757
PP G GGGGG + Q P P G GG PP P
Sbjct: 33 PPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAP 72
>U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family
protein 2 protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -2
Query: 540 GGGGXPPXXFF-FXXGGXPPPXXGXPP 463
G GG PP FF G PP G PP
Sbjct: 26 GAGGPPPNLFFSMLQAGFPPGPVGSPP 52
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 662 GXGGGGGTSXXQXTPPPPXGGXG 730
G GGGGG PPP GG G
Sbjct: 34 GGGGGGGGCCAPPPPPPVCGGCG 56
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 668 GGGGGTSXXQXTPPPPXGGXGG 733
GGGGG PPP GG GG
Sbjct: 22 GGGGGGCCAPPPPPPCGGGCGG 43
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 653 FXXGXGGGGGTSXXQXTPPPPXGGXGGXFFSP 748
F GGGGG PPPP G GG P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPC-GCGGPSLPP 47
>U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (grd
related) protein10 protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 647 FFFXXGXGGGG-GTSXXQXTPPPPXGGXGG 733
FFF GGG G + PPPP G G
Sbjct: 22 FFFGAAGGGGACGCAPRPACPPPPPSGCSG 51
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/72 (30%), Positives = 23/72 (31%)
Frame = +1
Query: 322 PXQRKXXXKKXXPPPPQKXXXGGGXPXKKXXXXXPXQXGXXKEKXGXGGXPPXGGGXXPP 501
P Q+ P P GGG P P G G GG P GG PP
Sbjct: 139 PFQQAPQGMFNVPTGPPPLMGGGGDPR-----GPPGGMGGPPGHGGMGGPPGHGGQGGPP 193
Query: 502 XKKKXXWGGXPP 537
GG PP
Sbjct: 194 G--HGGMGGPPP 203
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/72 (30%), Positives = 23/72 (31%)
Frame = +1
Query: 322 PXQRKXXXKKXXPPPPQKXXXGGGXPXKKXXXXXPXQXGXXKEKXGXGGXPPXGGGXXPP 501
P Q+ P P GGG P P G G GG P GG PP
Sbjct: 419 PFQQAPQGMFNVPTGPPPLMGGGGDPR-----GPPGGMGGPPGHGGMGGPPGHGGQGGPP 473
Query: 502 XKKKXXWGGXPP 537
GG PP
Sbjct: 474 G--HGGMGGPPP 483
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGG 490
PPPPP GGG P GG + G GGG
Sbjct: 64 PPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGG 108
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 356 PPPPPKKXXXGGGXQXKKXGXXPPXXGGXKKKKXXGGGXPXXGGG 490
PPPPP GGG P GG + G GGG
Sbjct: 64 PPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGG 108
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/93 (26%), Positives = 28/93 (30%), Gaps = 4/93 (4%)
Frame = +2
Query: 467 GXPXXGGGXPPXXKKXXXGGX--PPPPRXXGXKXXFXXXXXPXPXGXPXXXGEXKKXPXX 640
G P G + GG P PP G P G P GE ++ P
Sbjct: 171 GAPGQAGAPGNDGRPGQSGGAAIPGPPGPPGPSGQPGQDGHPGQDGQPGQPGESREVPGA 230
Query: 641 PPFFFXXGXGGGGGTSXXQXTP--PPPXGGXGG 733
P G G G S P P G GG
Sbjct: 231 PGPAGQPGSQGEPGPSGPDGRPGQPGQAGQPGG 263
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Frame = +1
Query: 475 PXGGGXXPPXKKKXXWGGXPPPXKXXXKXP----FXXXXXAXPPGXPXXXRGKXKXPXXP 642
P G PP + W G PPP P F PPG P P P
Sbjct: 95 PPRGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGPHRP 154
Query: 643 P 645
P
Sbjct: 155 P 155
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 668 GGGGGTSXXQXTPPPPXGGXGGXFFSPPXP 757
GG GG P P GG GG PP P
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAP 645
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 668 GGGGGTSXXQXTPPPPXGGXGGXFFSPPXP 757
GG GG P P GG GG PP P
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAP 645
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = +2
Query: 647 FFFXXGXGGGGGTSXXQXTP-----PPPXGGXGGXFFSPPXPXXXXKKXXXXXXXGGA 805
F F GGGGG P PPP GG +PP P GGA
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPPPACAPPPAPACGGG--APPPPAYAAPAPSYGAPAGGA 72
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 662 GXGGGGGTSXXQXTPPPPXGGXGG 733
G GGGGG PPPP G GG
Sbjct: 23 GMGGGGGCGCG-APPPPPACGCGG 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,829,804
Number of Sequences: 27780
Number of extensions: 359263
Number of successful extensions: 1840
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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