Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_J09
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    30   2.8  
10_08_0618 + 19307658-19308584,19308690-19309082                       29   3.8  
11_01_0463 + 3594527-3594862                                           29   6.6  
10_08_0619 + 19312935-19313570                                         29   6.6  
06_01_0964 - 7417158-7417517,7417596-7417868,7418400-7418810,741...    29   6.6  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
06_03_0218 + 18219956-18220555                                         28   8.7  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +2

Query: 518 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 664
           CWR  +        T  D Q    +    +KD    P + PSC L+F P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIP 331


>10_08_0618 + 19307658-19308584,19308690-19309082
          Length = 439

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = +1

Query: 691 FLPSGS---VALSHSSRCRYLSFGVGRSLQAGL 780
           FLP G    V ++ S R R + FGVGR + AGL
Sbjct: 400 FLPGGDGEGVDMTGSKRIRMMPFGVGRRMCAGL 432


>11_01_0463 + 3594527-3594862
          Length = 111

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
 Frame = -2

Query: 821 DKAQRSG*TGVRAHSPAWSERPTPKL--------RYLQREL*ESATLPEGRKADRYPVSG 666
           ++ +R G TG  A    W ERPT +         + ++R   ES + P  R+        
Sbjct: 32  EEEKRGGRTGATASGDRWEERPTARRDRLGLEPGKEMERRRSESLSAPRARRLPGTCNGE 91

Query: 665 RVGTGERTR-ELPGGNAWYL 609
             G G+  R E   G AW L
Sbjct: 92  EGGGGKAARTEEERGAAWLL 111


>10_08_0619 + 19312935-19313570
          Length = 211

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = +1

Query: 691 FLPSGS---VALSHSSRCRYLSFGVGRSLQAGL 780
           FLP G    V ++ S R R + FGVGR + AG+
Sbjct: 112 FLPGGDGEGVDMTGSKRIRMMPFGVGRRMCAGI 144


>06_01_0964 -
           7417158-7417517,7417596-7417868,7418400-7418810,
           7419270-7419347
          Length = 373

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 25/84 (29%), Positives = 38/84 (45%)
 Frame = +1

Query: 526 FFHRLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTLPLTGYLSAFLPSG 705
           FF    P ++ ++  RS ++ +  T +     +  G SL    +  LP + Y S   P  
Sbjct: 94  FFLNDLPGNDFNQLFRSLEKIKTSTTM-----YHKGDSLPSYYISGLPKS-YYSRLFPRQ 147

Query: 706 SVALSHSSRCRYLSFGVGRSLQAG 777
           SV L HSS C +    V   L+AG
Sbjct: 148 SVHLFHSSYCLHWRSQVPEGLEAG 171


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 350 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 505
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 299 NESAN---ARGEAVCVLGALPLPRSLTRCAR 382
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -1

Query: 720 RKRHASRREKGGQVSRKRQGRNRRAHEGASRGKRLVS 610
           R R   R E  G  + KR+GR R    G  RGKR  S
Sbjct: 105 RARRERRLEAAG--AEKREGRRRGGSSGGLRGKRRAS 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,296,767
Number of Sequences: 37544
Number of extensions: 545201
Number of successful extensions: 1748
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)