Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_J03
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75547-8|CAA99898.1| 126|Caenorhabditis elegans Hypothetical pr... 61 9e-10
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 30 2.7
U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe chro... 29 6.2
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 6.2
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 6.2
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 29 6.2
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 29 6.2
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 29 6.2
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 29 6.2
>Z75547-8|CAA99898.1| 126|Caenorhabditis elegans Hypothetical
protein R11D1.8 protein.
Length = 126
Score = 61.3 bits (142), Expect = 9e-10
Identities = 45/119 (37%), Positives = 64/119 (53%)
Frame = +2
Query: 137 LNWMIIRNNNAFLMKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTV 316
L W +IRNN+AFL +R I K FS E N+ ++S +Y+GL +K A+ V + KG V
Sbjct: 5 LVWQVIRNNSAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDV--SAAAKGVVV 62
Query: 317 VYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQ 493
K K +PAK + ++ + V+RL K N K RRA+AI+RSQ
Sbjct: 63 STKNEKG--RPAKAVTTSTL---SKTPVASVRRLAK-NAGFNKFNKLAQRRAAAIVRSQ 115
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 115 CKECRRSTELDDHPQQQCIPYEEAQYQKAVQQGAEQCD*P 234
C++C+ S + QQQCIP A QQ C P
Sbjct: 235 CQQCQSSCQQTQQCQQQCIPLCNQPSAPACQQCQSACQSP 274
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +1
Query: 115 CKECRRSTELDDHPQQQCIPYEEAQYQKAVQQGAEQCD*P---PLLQVQRLDSQESRWCR 285
C++C+ S + QQQCIP + QQ C P P + L++ S+ +
Sbjct: 442 CQQCQASCQQTQQCQQQCIPQCQQPSAPQCQQCQSACQFPVVAPQVVAVILEASVSQSAQ 501
Query: 286 GEP 294
EP
Sbjct: 502 CEP 504
>U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe
chromosome segregationprotein) homolog protein 1
protein.
Length = 307
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 432 TTAQTYARLPFVVLQPSSAPRGPSKQKRLRQPQP 533
+T T R P ++ PSS P GPSK + P P
Sbjct: 213 STIPTNRRAPMLIA-PSSTPAGPSKPTARKPPTP 245
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 115 CKECRRSTELDDHPQQQCIPYEEAQYQKAVQQGAEQCD*P 234
C++C+ S + QQQCIP + QQ C P
Sbjct: 289 CQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSP 328
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 115 CKECRRSTELDDHPQQQCIPYEEAQYQKAVQQGAEQCD*P 234
C++C+ S + QQQCIP + QQ C P
Sbjct: 290 CQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSP 329
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 115 CKECRRSTELDDHPQQQCIPYEEAQYQKAVQQGAEQCD*P 234
C++C+ S + QQQCIP + QQ C P
Sbjct: 205 CQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSP 244
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 115 CKECRRSTELDDHPQQQCIPYEEAQYQKAVQQGAEQCD*P 234
C++C+ S + QQQCIP + QQ C P
Sbjct: 205 CQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSP 244
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 115 CKECRRSTELDDHPQQQCIPYEEAQYQKAVQQGAEQCD*P 234
C++C+ S + QQQCIP + QQ C P
Sbjct: 205 CQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSP 244
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 115 CKECRRSTELDDHPQQQCIPYEEAQYQKAVQQGAEQCD*P 234
C++C+ S + QQQCIP + QQ C P
Sbjct: 205 CQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSP 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,734,788
Number of Sequences: 27780
Number of extensions: 320123
Number of successful extensions: 872
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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