Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I24
         (836 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1068 - 27341103-27341444,27341689-27341929,27342030-273423...    29   4.6  

>06_03_1068 -
           27341103-27341444,27341689-27341929,27342030-27342343,
           27342672-27343805
          Length = 676

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 216 AHXLEEDRXSLLFNXYGIHIFCLYVLGLLYCTAER 112
           AH  +ED  SLLFN  G   F L ++G L+  + R
Sbjct: 145 AHSNQEDSGSLLFNLIGNLAFPLILIGGLFLLSRR 179


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,135,229
Number of Sequences: 37544
Number of extensions: 241371
Number of successful extensions: 299
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)