Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I22
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and bel...    30   1.9  
AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and bel...    30   1.9  
AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and bel...    30   1.9  
Z74041-8|CAA98519.2|  610|Caenorhabditis elegans Hypothetical pr...    30   2.5  
DQ482732-1|ABF20555.1|  610|Caenorhabditis elegans SNF-11 protein.     30   2.5  
AY529124-1|AAT02634.1|  610|Caenorhabditis elegans GABA transpor...    30   2.5  
Z67995-2|CAA91944.2|  458|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AF039050-3|AAC47936.2|  498|Caenorhabditis elegans Cytochrome p4...    28   9.9  

>AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform c protein.
          Length = 660

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 638 LINPEAAAKYGIHKENDYFVYKANYSNAVLYNNEE 742
           +++P       IHKE   F YK+N   A+LY   E
Sbjct: 227 VLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRE 261


>AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform b protein.
          Length = 644

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 638 LINPEAAAKYGIHKENDYFVYKANYSNAVLYNNEE 742
           +++P       IHKE   F YK+N   A+LY   E
Sbjct: 211 VLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRE 245


>AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform a protein.
          Length = 641

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 638 LINPEAAAKYGIHKENDYFVYKANYSNAVLYNNEE 742
           +++P       IHKE   F YK+N   A+LY   E
Sbjct: 208 VLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRE 242


>Z74041-8|CAA98519.2|  610|Caenorhabditis elegans Hypothetical
           protein T03F7.1 protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 643 NEAILHLCYVNFLQHFHIHKHFRVYFIRSRNNETVAIRALDNSDVEGIQE 494
           N  I     V  L H HIH++ + +F+  + N TV   A D S V  ++E
Sbjct: 152 NRTIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVC-SAADLSVVSPVKE 200


>DQ482732-1|ABF20555.1|  610|Caenorhabditis elegans SNF-11 protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 643 NEAILHLCYVNFLQHFHIHKHFRVYFIRSRNNETVAIRALDNSDVEGIQE 494
           N  I     V  L H HIH++ + +F+  + N TV   A D S V  ++E
Sbjct: 152 NRTIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVC-SAADLSVVSPVKE 200


>AY529124-1|AAT02634.1|  610|Caenorhabditis elegans GABA transporter
           protein protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 643 NEAILHLCYVNFLQHFHIHKHFRVYFIRSRNNETVAIRALDNSDVEGIQE 494
           N  I     V  L H HIH++ + +F+  + N TV   A D S V  ++E
Sbjct: 152 NRTIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVC-SAADLSVVSPVKE 200


>Z67995-2|CAA91944.2|  458|Caenorhabditis elegans Hypothetical
           protein M153.2 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 673 NAILSCGFRINEAILHLCYVNFLQHFHIHK 584
           +AI+ CG  ++  +  LCY+NF Q   + K
Sbjct: 295 DAIILCGTIVHLVVYALCYINFPQDSSLKK 324


>AF039050-3|AAC47936.2|  498|Caenorhabditis elegans Cytochrome p450
           family protein 34A6 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 202 SFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEF 321
           +F   +S ++TDDE +K  K+++ E  M+N   +K +  F
Sbjct: 397 AFATQLSAMHTDDETFKNHKEFNPERFMENNNLEKKLIPF 436


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,197,130
Number of Sequences: 27780
Number of extensions: 376183
Number of successful extensions: 1025
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)