Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I20
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195...    79   5e-15
05_07_0070 + 27479654-27479672,27479864-27479922,27480339-274803...    54   1e-07
01_06_0260 - 27959188-27959251,27959342-27959424,27960220-279603...    54   1e-07
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475           42   5e-04
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520     41   0.001

>03_05_0467 -
           24615243-24615384,24619166-24619450,24619516-24619596,
           24619807-24619904,24620038-24620190,24620705-24620760,
           24620844-24621003,24621416-24621646,24621795-24621903,
           24622642-24622799
          Length = 490

 Score = 79.0 bits (186), Expect = 5e-15
 Identities = 37/93 (39%), Positives = 51/93 (54%)
 Frame = +1

Query: 442 KYMTELXGYDRLLPMNTGVEGGESACXIARKWGYXVXXIPEGQAXIXXAEXNFWGRTLSA 621
           +Y+T + GY+ +LPMNTG EG E+A  + RKWGY    IP+ +A I      F GRTL  
Sbjct: 124 EYLTSMFGYEMMLPMNTGAEGVETAIKLVRKWGYEKKKIPKNEALIVSCCGCFHGRTLGV 183

Query: 622 VSSSSXPTCYXGFXPXMPGFILXPYNNXPXLXK 720
           +S S       GF P +PG +   + +   L K
Sbjct: 184 ISMSCDNDATRGFGPLVPGHLKVDFGDTDGLEK 216


>05_07_0070 +
           27479654-27479672,27479864-27479922,27480339-27480378,
           27480477-27480565,27481065-27481147,27481219-27481282
          Length = 117

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 31/87 (35%), Positives = 41/87 (47%)
 Frame = +3

Query: 102 RRTKKVGITXQIWHTITVPLYVKWSKXWK*PNTQRILAHLCGKDAMKRSCVRIWSCKRCK 281
           +RTKK GI  +        L  K  K  +     +     CGK A+KR  V IW CK C 
Sbjct: 28  KRTKKAGIVGKYGTRYGASLR-KQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCG 86

Query: 282 XTVAXGAWVFSTTAASSCRSAVXXLRE 362
              A GA+  +T +A + RS +  LRE
Sbjct: 87  KVKAGGAYTMNTASAVTVRSTIRRLRE 113


>01_06_0260 -
           27959188-27959251,27959342-27959424,27960220-27960308,
           27960388-27960427,27960938-27960981,27961240-27961288
          Length = 122

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 31/87 (35%), Positives = 41/87 (47%)
 Frame = +3

Query: 102 RRTKKVGITXQIWHTITVPLYVKWSKXWK*PNTQRILAHLCGKDAMKRSCVRIWSCKRCK 281
           +RTKK GI  +        L  K  K  +     +     CGK A+KR  V IW CK C 
Sbjct: 33  KRTKKAGIVGKYGTRYGASLR-KQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCG 91

Query: 282 XTVAXGAWVFSTTAASSCRSAVXXLRE 362
              A GA+  +T +A + RS +  LRE
Sbjct: 92  KVKAGGAYTMNTASAVTVRSTIRRLRE 118


>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
          Length = 465

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
 Frame = +1

Query: 406 SIKFRSNLASMKKYMTELXGYDRLLPMNTGVEGGESACXIARKWGYXVXXIPEGQAXIXX 585
           ++++     ++ K + E    DR+   NTG E  E+A   ARK+       P+G A    
Sbjct: 136 NVQYTVPQVALAKRLVEASFADRVFFANTGTEANEAAIKFARKFQRVAR--PDGDAPTEF 193

Query: 586 AEXN--FWGRTLSAVSSSSXPTCYXGFXPXMPGFILXPYNNXPXLXKAL 726
                 F GRT+ +++ +S       F P MPG     Y N     K +
Sbjct: 194 MSFTNCFHGRTMGSLALTSKVQYREPFAPVMPGATFAEYGNLEEAKKVI 242


>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
          Length = 448

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = +1

Query: 469 DRLLPMNTGVEGGESACXIARKWGYXVXXIPEGQAXIXXAEXN--FWGRTLSAVSSSSXP 642
           DR+   NTG E  E+A   ARK  Y     P+G A          F GRT+ +++ +S  
Sbjct: 168 DRVFFANTGTEANEAAIKFARK--YQRVARPDGDAPTEFMSFTNCFHGRTMGSLALTSKV 225

Query: 643 TCYXGFXPXMPGFILXPYNNXPXLXKAL 726
                F P MPG     Y N     K +
Sbjct: 226 QYREPFAPVMPGATFAEYGNLEEAKKVI 253


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,971,738
Number of Sequences: 37544
Number of extensions: 297615
Number of successful extensions: 523
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)