Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I18
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0129 + 17520753-17520842,17521651-17521741,17521887-175220...    99   4e-21
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26...    29   3.7  
03_05_0626 + 26233178-26233233,26234083-26234284,26234800-262349...    28   8.6  
02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,278...    28   8.6  

>03_04_0129 +
           17520753-17520842,17521651-17521741,17521887-17522070,
           17522149-17522224
          Length = 146

 Score = 99.1 bits (236), Expect = 4e-21
 Identities = 42/82 (51%), Positives = 59/82 (71%)
 Frame = +2

Query: 239 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 418
           W+Y R A+I R IY+R  +GV    KI+GGR+RNG  P HFC+SSG+I+R  LQ L+ + 
Sbjct: 55  WYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMG 114

Query: 419 LVEKVQDGGRILTTQGRRDLXQ 484
           +++    GGR++T+QGRRDL Q
Sbjct: 115 IIDVDPKGGRLITSQGRRDLDQ 136



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = +3

Query: 96  TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*P 233
           TVKDV   + VK  +AHLK++GK+++PE +D+VKTARFKEL P  P
Sbjct: 8   TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDP 53


>08_01_0036 -
           267236-268165,268255-268299,268485-268574,269485-269805,
           269895-270098,271532-271664,271810-271881,273106-273168,
           273252-275034,275169-275217
          Length = 1229

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +3

Query: 231 PXIGSMCVVLPSFVIFTFAHLLESRLSPRSLVGANVMELHLHISAGHQAVL 383
           P +G++ + LP F+       +   LSPR L+ A V EL L    GH A L
Sbjct: 160 PELGNLVLALPGFLSLVAVRSIPQELSPR-LLWAPVFEL-LADHRGHPAFL 208


>03_05_0626 +
           26233178-26233233,26234083-26234284,26234800-26234968,
           26235767-26238768
          Length = 1142

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 190 RSMCSGTLTLPVFFK*AATVLTILSCSTSFTVTERILPCVDNRKKKKSKILRNSL 26
           R+   G ++LPV     A  L   + S S   TE I+P  D+  K  S+  R++L
Sbjct: 799 RNATEGVISLPVHAAELAASLDAQASSQSIPPTELIIPKPDHASKVHSEGTRSTL 853


>02_01_0385 +
           2783387-2783695,2784149-2785082,2785206-2785309,
           2785402-2785486,2785517-2787578,2787732-2787753,
           2788157-2788327,2791473-2791517,2792558-2793874,
           2793962-2794012,2794090-2794188,2794352-2794504,
           2794554-2794571
          Length = 1789

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 203 SCLYKIHVLRYLDFARFF*VS-SDSFNNLVLFNILYCDGTHL 81
           S +YK+ +LRYLD +     S S SFN+L+    L    T+L
Sbjct: 550 SSVYKLKLLRYLDASSLRISSFSKSFNHLLNLQALILSNTYL 591


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,704,370
Number of Sequences: 37544
Number of extensions: 327706
Number of successful extensions: 820
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)