Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I17
         (1083 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0199 + 32310272-32311432                                         29   4.8  
03_01_0303 + 2369607-2371958                                           29   6.4  

>03_06_0199 + 32310272-32311432
          Length = 386

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +2

Query: 176 RLRVSAAPGNFFK-DLEKMGQRVRDAVISAAPAGD-TLAKAKALGQG 310
           RL  +AA G F + DL  +G+  R  ++++AP GD  LA+A    +G
Sbjct: 44  RLFANAATGRFLRMDLPLLGRGRRYRLVASAPGGDLVLAEASPPARG 90


>03_01_0303 + 2369607-2371958
          Length = 783

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -1

Query: 216 SLKKLPGAAETRSRVRKQ*RTXXHXKFSRISFCXTCAETRNSTYXAAT 73
           +L++LPG A  R+  R +  T    +F  + FC T A  R S Y   T
Sbjct: 102 ALRELPGVASVRADRRVELHTTYSYRFLGLDFCPTGAWAR-SGYGGGT 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,256,562
Number of Sequences: 37544
Number of extensions: 186076
Number of successful extensions: 340
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3234583292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)