Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I11
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0051 + 12863978-12864476,12864575-12864674,12865567-128656...    31   1.6  
09_03_0156 - 12844549-12845138,12845237-12845723                       31   1.6  
04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.7  
03_02_0197 + 6337212-6337278,6339261-6340517,6340599-6340626,634...    29   3.7  
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    28   8.6  
03_05_0394 + 23758392-23758625,23759097-23759273,23759349-237594...    25   9.7  

>11_04_0051 +
           12863978-12864476,12864575-12864674,12865567-12865657,
           12866114-12866176,12866364-12866549,12866994-12867024,
           12867054-12867502
          Length = 472

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +3

Query: 642 EKICYNYGIIKENEQFVMYANYSNSLTYPNNEDRIAYLTEDVGLNAYYYYF 794
           E+    + + + N +F+   N    LTY   E+  A LTE+  L  Y  Y+
Sbjct: 66  EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYY 116


>09_03_0156 - 12844549-12845138,12845237-12845723
          Length = 358

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +3

Query: 642 EKICYNYGIIKENEQFVMYANYSNSLTYPNNEDRIAYLTEDVGLNAYYYYF 794
           E+    + + + N +F+   N    LTY   E+  A LTE+  L  Y  Y+
Sbjct: 62  EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGYY 112


>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 273  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 371
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>03_02_0197 +
           6337212-6337278,6339261-6340517,6340599-6340626,
           6340735-6340897
          Length = 504

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +1

Query: 295 MKAYENFMMMYKVGFLPKNLEFSIFYE-KMREEAIALFKLFYYAKDFECFYKTACYARVY 471
           +  Y  +  M   G +P  L++++F      +EA+    L +Y   F+     A +A  Y
Sbjct: 197 LNVYPYYDYMRSNGVIP--LDYALFRPLPPNKEAVDANTLLHYTNVFDAVVDAAYFAMAY 254

Query: 472 MNQGNVLIRLLHSYYP 519
           +N  NV + +  + +P
Sbjct: 255 LNVTNVPVMVTETGWP 270


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 639 DEKICYNYGIIKENEQFVM 695
           DE +C+ YG ++ENE +++
Sbjct: 459 DEVLCWLYGTVRENEDYIL 477


>03_05_0394 +
           23758392-23758625,23759097-23759273,23759349-23759453,
           23759640-23759681,23759763-23759960,23760037-23760165,
           23760248-23760377,23761119-23761179,23761241-23761322,
           23761402-23761653
          Length = 469

 Score = 24.6 bits (51), Expect(2) = 9.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 585 TWKLXIKWTTLKMMDGCL 638
           TWK+ I++T L    GCL
Sbjct: 324 TWKIRIRFTCLAKRAGCL 341



 Score = 21.8 bits (44), Expect(2) = 9.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 633 CLDEKICYNYGIIKENEQFVMYANYSNSL 719
           CLD  + Y    +K N+ F     +SNS+
Sbjct: 373 CLDLALKYVECCLKHNQHFEQNEPHSNSI 401


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,280,612
Number of Sequences: 37544
Number of extensions: 397004
Number of successful extensions: 965
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)