Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I11
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23645-1|AAK26138.1|  582|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical p...    29   5.9  
Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81546-4|CAB04453.1|  184|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>L23645-1|AAK26138.1|  582|Caenorhabditis elegans Hypothetical
           protein F54F2.5a protein.
          Length = 582

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 500 YYIAIIQRSDTANFVLPAPYEAYPQYFVNMEVXNKMDYVKDDGWLP*RENML*LRNYQRK 679
           YY    Q S   N   P+P E  P+   N+     + Y      +         R+Y+ K
Sbjct: 24  YYYLNSQESQAPN--TPSPQEVPPKKMTNLFESGPLVYEDVAADIEAVTERASRRHYENK 81

Query: 680 RTIRNVRQLFQFPD-LPQQRRQNCLLN 757
             ++N R++F   + LP  R   CL N
Sbjct: 82  MVVKNSREMFDNVNILPDGRYYCCLCN 108


>Z70686-10|CAD21656.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = -3

Query: 486 IALVHVDSGVACCFVETFKIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHE 313
           + L H  +G     V   +I+G       RDG F HF V K +E +Q LG  ++ V H E
Sbjct: 407 VLLTHKPTGSFLVRVSE-RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDE 463

Query: 312 IF--VGFH 295
           +F  V +H
Sbjct: 464 LFDLVAYH 471


>Z70683-8|CAD21626.1|  533|Caenorhabditis elegans Hypothetical
           protein F13B12.6 protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = -3

Query: 486 IALVHVDSGVACCFVETFKIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHE 313
           + L H  +G     V   +I+G       RDG F HF V K +E +Q LG  ++ V H E
Sbjct: 407 VLLTHKPTGSFLVRVSE-RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDE 463

Query: 312 IF--VGFH 295
           +F  V +H
Sbjct: 464 LFDLVAYH 471


>Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -3

Query: 288 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 148
           + +  GL  +      +LS+IV L+    + +   Q LLLLF  ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298


>Z81546-4|CAB04453.1|  184|Caenorhabditis elegans Hypothetical
           protein F53A2.5 protein.
          Length = 184

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -3

Query: 162 VNRCCFEF-RYGATESEGNKPR*NQDKSSWSEHVEANCQNLKEVP 31
           +N CC EF ++ A E++    + +Q K+ + EHV+   QNL   P
Sbjct: 48  INACCVEFVKHIAREAQRIASQ-DQRKTIYHEHVQKALQNLGFTP 91


>Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -3

Query: 288 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 148
           + +  GL  +      +LS+IV L+    + +   Q LLLLF  ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,924,150
Number of Sequences: 27780
Number of extensions: 369662
Number of successful extensions: 1056
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)