Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_I10
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 30 1.9
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81507-1|CAB04133.1| 485|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF036698-2|AAB88353.1| 485|Caenorhabditis elegans Puf (pumilio/... 30 2.5
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 29 3.3
U13019-4|AAC24451.1| 222|Caenorhabditis elegans Hypothetical pr... 29 4.3
U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 209 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 319
D D + EK + +KK IT++VN +IRN C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 209 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 319
D D + EK + +KK IT++VN +IRN C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241
>Z81507-1|CAB04133.1| 485|Caenorhabditis elegans Hypothetical
protein F18A11.1 protein.
Length = 485
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 266 VITNVVNKLIRNNKMNCMEYAYQLWLQGSKDIVRDCFPVEFRLIFAENAIKLMYKRDGL 442
++ V+++L N K+ C ++ QL IVR+C+ + FA I+ + K G+
Sbjct: 257 LVQQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLSSN-EFANYVIQYVIKSSGI 314
>AF036698-2|AAB88353.1| 485|Caenorhabditis elegans Puf
(pumilio/fbf) domain-containingprotein 7 protein.
Length = 485
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 266 VITNVVNKLIRNNKMNCMEYAYQLWLQGSKDIVRDCFPVEFRLIFAENAIKLMYKRDGL 442
++ V+++L N K+ C ++ QL IVR+C+ + FA I+ + K G+
Sbjct: 257 LVQQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLSSN-EFANYVIQYVIKSSGI 314
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 29.5 bits (63), Expect = 3.3
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Frame = +3
Query: 45 DFGSSFLGNTQDSTLQ-R*SPL*LFYVFSWH--LCMLQIPTSLTTFWRSSFTIASSSPIT 215
D ++F N + TL+ P + VF W+ L + S ++ F + P T
Sbjct: 170 DANATFSNNLEPDTLRLHPDPAIISRVFEWYSNATNLYVTPSQGVYYIQYFRADLNEPTT 229
Query: 216 TVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTSSGIVSQLSSDL 395
T A T A +S + TN TT ST + +P+TSS VS +S
Sbjct: 230 TSTAYAAPSST----ASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSSQPVSSSTSST 285
Query: 396 SSP 404
SSP
Sbjct: 286 SSP 288
>U13019-4|AAC24451.1| 222|Caenorhabditis elegans Hypothetical
protein T12A2.15b protein.
Length = 222
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 497 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 595
D KD+ +P VS KL+AL N +V+ K T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152
>U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical
protein T12A2.15a protein.
Length = 713
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 497 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 595
D KD+ +P VS KL+AL N +V+ K T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 336 FGSRAPRTSSGIVSQLSSDL--SSPKTRLSLCTSATVS 443
FG APRT SG + Q S++L S+PKT A++S
Sbjct: 145 FGVLAPRTLSGSIPQTSTNLEDSTPKTSTGGRFGASIS 182
>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
protein C44H9.4 protein.
Length = 1099
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 488 AYGDGKDKTSPRVSWKLIALWENNK---VYFKILNTERNQYLVLGVGTNWNGDH 640
++G + PR ++ I+ + + YF++L+ E N+Y+++ N +G H
Sbjct: 129 SWGPNFNSPKPRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLH 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,485,956
Number of Sequences: 27780
Number of extensions: 343080
Number of successful extensions: 1131
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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