Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I07
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79604-3|CAD36502.1|  817|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z79604-2|CAB01900.1|  780|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF332205-1|AAK17976.1|  817|Caenorhabditis elegans nuclear recep...    31   1.1  
AF332204-1|AAK17975.1|  519|Caenorhabditis elegans nuclear recep...    31   1.1  
AF016449-9|AAG23993.2|  351|Caenorhabditis elegans Serpentine re...    29   3.3  
AC006713-1|AAK68407.2|  310|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z81579-8|CAN86617.1|  930|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z81579-7|CAB61019.1|  927|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AF016852-1|AAB94551.1|  927|Caenorhabditis elegans HMP-1 protein.      29   5.7  
Z82264-10|CAB54196.1|  384|Caenorhabditis elegans Hypothetical p...    28   9.9  

>Z79604-3|CAD36502.1|  817|Caenorhabditis elegans Hypothetical
           protein ZK662.3b protein.
          Length = 817

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = -3

Query: 443 STANCSCMCVRLSSG*SIVQEVT 375
           ST  CSCMC R   G  IV EVT
Sbjct: 493 STCTCSCMCGRYPPGSCIVDEVT 515


>Z79604-2|CAB01900.1|  780|Caenorhabditis elegans Hypothetical
           protein ZK662.3a protein.
          Length = 780

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = -3

Query: 443 STANCSCMCVRLSSG*SIVQEVT 375
           ST  CSCMC R   G  IV EVT
Sbjct: 456 STCTCSCMCGRYPPGSCIVDEVT 478


>AF332205-1|AAK17976.1|  817|Caenorhabditis elegans nuclear receptor
           NHR-48 protein.
          Length = 817

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = -3

Query: 443 STANCSCMCVRLSSG*SIVQEVT 375
           ST  CSCMC R   G  IV EVT
Sbjct: 493 STCTCSCMCGRYPPGSCIVDEVT 515


>AF332204-1|AAK17975.1|  519|Caenorhabditis elegans nuclear receptor
           NHR-48 protein.
          Length = 519

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = -3

Query: 443 STANCSCMCVRLSSG*SIVQEVT 375
           ST  CSCMC R   G  IV EVT
Sbjct: 195 STCTCSCMCGRYPPGSCIVDEVT 217


>AF016449-9|AAG23993.2|  351|Caenorhabditis elegans Serpentine
           receptor, class t protein9 protein.
          Length = 351

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 454 KRVCLQPTAVVCVFACLPAKV-LFRRSLYSADLVKVVEKVFWFWTSPFM 311
           K   +  + ++CVF  + A + LF R +Y    + ++  + W W+S  M
Sbjct: 235 KTKLISQSIILCVFHAVAAGIYLFMRFIYYTPTLIILSHIIWGWSSGCM 283


>AC006713-1|AAK68407.2|  310|Caenorhabditis elegans Hypothetical
           protein Y119D3A.4 protein.
          Length = 310

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 425 NCSWL*TNALLANSHWKFAFGTRMIRLMFVAQYLRLKSDKLCYSCEYI 568
           NCS L  +++  N+ WK+  G   ++L F    + LK     Y   Y+
Sbjct: 74  NCSLLSGSSVWCNNEWKYLEGENCLKLAFNDLKILLKHASCLYIISYL 121


>Z81579-8|CAN86617.1|  930|Caenorhabditis elegans Hypothetical
           protein R13H4.4b protein.
          Length = 930

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 400 PEDKRTHIQLQLAVDKRASGKFPLEVRVWDE 492
           PE+++  IQ Q+ + K    +F  EV  WDE
Sbjct: 683 PEEEKKKIQAQIDIFKVTQTRFEREVAKWDE 713


>Z81579-7|CAB61019.1|  927|Caenorhabditis elegans Hypothetical
           protein R13H4.4a protein.
          Length = 927

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 400 PEDKRTHIQLQLAVDKRASGKFPLEVRVWDE 492
           PE+++  IQ Q+ + K    +F  EV  WDE
Sbjct: 683 PEEEKKKIQAQIDIFKVTQTRFEREVAKWDE 713


>AF016852-1|AAB94551.1|  927|Caenorhabditis elegans HMP-1 protein.
          Length = 927

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 400 PEDKRTHIQLQLAVDKRASGKFPLEVRVWDE 492
           PE+++  IQ Q+ + K    +F  EV  WDE
Sbjct: 683 PEEEKKKIQAQIDIFKVTQTRFEREVAKWDE 713


>Z82264-10|CAB54196.1|  384|Caenorhabditis elegans Hypothetical
           protein C49C3.10 protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 43  DFWRSSTTAPTETCTPYFVLF*FRIT-LLFRASLYSRKNVEMWTLHCV 183
           DF  S+   PT   TPY V   +R   ++   +  ++ NV++W+L C+
Sbjct: 168 DFGHSNKEDPTSN-TPYIVQRFYRAPEIICETTDNNKTNVDIWSLGCI 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,812,893
Number of Sequences: 27780
Number of extensions: 288917
Number of successful extensions: 707
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)