Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I05
         (882 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537846-1|CAD97855.1|  243|Homo sapiens hypothetical protein pr...    31   4.2  
BC053688-1|AAH53688.1|  890|Homo sapiens Rho GTPase activating p...    31   4.2  
AL591806-11|CAI15374.1|  890|Homo sapiens Rho GTPase activating ...    31   4.2  
AL591806-10|CAI15373.1|  577|Homo sapiens Rho GTPase activating ...    31   4.2  
AK160366-1|BAD18709.1| 1110|Homo sapiens FLJ00267 protein protein.     31   4.2  

>BX537846-1|CAD97855.1|  243|Homo sapiens hypothetical protein
           protein.
          Length = 243

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +3

Query: 6   IPXPFXTYRESLKILESSG-RTETE*A*YLNFILKRILVLKSRTLNFLNQHSSFYTCVSL 182
           +P P  TYR   K  E+ G + E E    +  +L+ + V   RTL FL +H       S 
Sbjct: 101 LPDPLLTYRLYDKFAEAVGVQLEPERLVKILEVLRELPVPNYRTLEFLMRHLVHMASFSA 160

Query: 183 EENKN*RNM 209
           + N + RN+
Sbjct: 161 QTNMHARNL 169


>BC053688-1|AAH53688.1|  890|Homo sapiens Rho GTPase activating
           protein 30 protein.
          Length = 890

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +3

Query: 6   IPXPFXTYRESLKILESSG-RTETE*A*YLNFILKRILVLKSRTLNFLNQHSSFYTCVSL 182
           +P P  TYR   K  E+ G + E E    +  +L+ + V   RTL FL +H       S 
Sbjct: 101 LPDPLLTYRLYDKFAEAVGVQLEPERLVKILEVLRELPVPNYRTLEFLMRHLVHMASFSA 160

Query: 183 EENKN*RNM 209
           + N + RN+
Sbjct: 161 QTNMHARNL 169


>AL591806-11|CAI15374.1|  890|Homo sapiens Rho GTPase activating
           protein 30 protein.
          Length = 890

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +3

Query: 6   IPXPFXTYRESLKILESSG-RTETE*A*YLNFILKRILVLKSRTLNFLNQHSSFYTCVSL 182
           +P P  TYR   K  E+ G + E E    +  +L+ + V   RTL FL +H       S 
Sbjct: 101 LPDPLLTYRLYDKFAEAVGVQLEPERLVKILEVLRELPVPNYRTLEFLMRHLVHMASFSA 160

Query: 183 EENKN*RNM 209
           + N + RN+
Sbjct: 161 QTNMHARNL 169


>AL591806-10|CAI15373.1|  577|Homo sapiens Rho GTPase activating
           protein 30 protein.
          Length = 577

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +3

Query: 6   IPXPFXTYRESLKILESSG-RTETE*A*YLNFILKRILVLKSRTLNFLNQHSSFYTCVSL 182
           +P P  TYR   K  E+ G + E E    +  +L+ + V   RTL FL +H       S 
Sbjct: 101 LPDPLLTYRLYDKFAEAVGVQLEPERLVKILEVLRELPVPNYRTLEFLMRHLVHMASFSA 160

Query: 183 EENKN*RNM 209
           + N + RN+
Sbjct: 161 QTNMHARNL 169


>AK160366-1|BAD18709.1| 1110|Homo sapiens FLJ00267 protein protein.
          Length = 1110

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +3

Query: 6   IPXPFXTYRESLKILESSG-RTETE*A*YLNFILKRILVLKSRTLNFLNQHSSFYTCVSL 182
           +P P  TYR   K  E+ G + E E    +  +L+ + V   RTL FL +H       S 
Sbjct: 110 LPDPLLTYRLYDKFAEAVGVQLEPERLVKILEVLRELPVPNYRTLEFLMRHLVHMASFSA 169

Query: 183 EENKN*RNM 209
           + N + RN+
Sbjct: 170 QTNMHARNL 178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,534,129
Number of Sequences: 237096
Number of extensions: 1557581
Number of successful extensions: 2528
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2528
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)