Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I04
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0261 + 1926458-1926523,1926959-1927144                           31   0.90 
12_01_0523 + 4162673-4164427                                           29   4.8  

>06_01_0261 + 1926458-1926523,1926959-1927144
          Length = 83

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 19/83 (22%), Positives = 33/83 (39%)
 Frame = +3

Query: 81  LVFQPLRIFVALITDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSXXXXXXXXXXXXXXX 260
           +VF  L  F  ++    LI   I+ ++   +L+ DY NP D  +                
Sbjct: 1   MVFVWLTAFFLVVA---LIVLVIYQLMCLADLEFDYINPFDSSSRINKVVIPEFVLQAAL 57

Query: 261 XXXXXXSGEWFSLLINIPLILYH 329
                 SG W   L++ P++ Y+
Sbjct: 58  SVLFLLSGHWAMFLLSAPMVYYN 80


>12_01_0523 + 4162673-4164427
          Length = 584

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 126 HRLLRQQIYAKAGKLNAIFKVLQMQLK 46
           HR+L   IYA +GK+N + KV  + +K
Sbjct: 416 HRVLLSNIYALSGKMNHVEKVRNVMIK 442


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,568,628
Number of Sequences: 37544
Number of extensions: 271784
Number of successful extensions: 492
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)