Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I02
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348...    29   6.6  
09_02_0376 + 8140260-8140811,8141390-8141464,8141542-8141598,814...    29   6.6  
07_03_0777 + 21450236-21450286,21450432-21450830,21450968-214511...    29   6.6  

>11_01_0450 -
           3487464-3487844,3487883-3488268,3488883-3489033,
           3489132-3491102,3492090-3492149,3492240-3492436,
           3492678-3492963
          Length = 1143

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -1

Query: 509 ILITKLSVIKGTWPSTRSSKPNNIAHVPVVNMPVLNSSFGPILLRW 372
           I +T LS + GTW S R   PN    +   ++  L SS     L W
Sbjct: 88  ITVTDLSSVHGTWISGRRIPPNTPVELTAGDVLRLGSSRREYRLHW 133


>09_02_0376 +
           8140260-8140811,8141390-8141464,8141542-8141598,
           8142645-8142833
          Length = 290

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 360 HLWSPSQQDRAEATVQYW 413
           H WSP Q  +AE  VQ+W
Sbjct: 238 HFWSPYQNVKAEQKVQWW 255


>07_03_0777 +
           21450236-21450286,21450432-21450830,21450968-21451132,
           21451527-21451790,21451963-21452172,21452300-21452539,
           21452640-21452777
          Length = 488

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +3

Query: 303 HRIWTGVR---GLRVSGVHCEPHLWSPSQQDRAEATVQYWHIDNRDVCYIVRFARSSRRP 473
           ++++ G R    +++SG+H     W       AE T  Y+++DNRD    +    +  R 
Sbjct: 280 NKVFLGCRVQLAIKISGIHW----WYRVPNHAAELTAGYYNLDNRDGYRTIARMLTRHRA 335

Query: 474 CXLYN-AQLCNKNRGGDGK 527
           C  +  A++ +  +  + K
Sbjct: 336 CVNFTCAEMRDSEQSSEAK 354


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,446,986
Number of Sequences: 37544
Number of extensions: 382369
Number of successful extensions: 1066
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)