Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I02
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67949-9|AAM69108.1|  486|Caenorhabditis elegans Hypothetical pr...    96   3e-20
U67949-8|AAD32274.1|  626|Caenorhabditis elegans Hypothetical pr...    96   3e-20
AF045642-13|AAC02585.1|  293|Caenorhabditis elegans Hypothetical...    35   0.069
Z81130-2|CAB03417.1|  463|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U20535-1|AAC46632.1|  463|Caenorhabditis elegans gld-1 protein.        29   4.5  

>U67949-9|AAM69108.1|  486|Caenorhabditis elegans Hypothetical
           protein F55A4.8b protein.
          Length = 486

 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 49/129 (37%), Positives = 76/129 (58%)
 Frame = +1

Query: 184 SKRQWLTIVVIGIADFCNAICVALQAPFYPKEAEKKGCTATEYXXXXXXXXXXXXXXSPI 363
           S RQ L+I ++ +A+ C+ I  +  APFYP EA+ K  + T+               SP+
Sbjct: 80  SSRQLLSISMLSLANLCSTIAFSCIAPFYPAEAKLKNLSETQTGIVFGIFEFTMFIISPL 139

Query: 364 YGAHLNRIGPKLLFNTGILTTGTCAILFGLLDRVEGHVPFITLSFVIRIVEAMGNAAFLT 543
           +G ++  IG + +F  GI  TG  AILFG L+ +     F   S ++RI+EA+G+AAF+T
Sbjct: 140 FGKYIIFIGARTMFIVGIAVTGVTAILFGFLNFLPSGNTFFWFSVLVRILEAVGDAAFVT 199

Query: 544 ASFAIIARN 570
           +SFAI A++
Sbjct: 200 SSFAIAAKS 208



 Score = 33.1 bits (72), Expect = 0.28
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = +3

Query: 549 FCYNSQEFPXNVATMFASIXXFFGLGLIVGPTXXXXXXXXXXXXXPFAVXGSALFCAA 722
           F   ++ FP NVA +   +  F GLG   GP              PF V G  L  A+
Sbjct: 202 FAIAAKSFPKNVAFVVGILETFAGLGYTAGPVIGGFFYDIGGFQLPFLVLGIVLLVAS 259


>U67949-8|AAD32274.1|  626|Caenorhabditis elegans Hypothetical
           protein F55A4.8a protein.
          Length = 626

 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 49/129 (37%), Positives = 76/129 (58%)
 Frame = +1

Query: 184 SKRQWLTIVVIGIADFCNAICVALQAPFYPKEAEKKGCTATEYXXXXXXXXXXXXXXSPI 363
           S RQ L+I ++ +A+ C+ I  +  APFYP EA+ K  + T+               SP+
Sbjct: 220 SSRQLLSISMLSLANLCSTIAFSCIAPFYPAEAKLKNLSETQTGIVFGIFEFTMFIISPL 279

Query: 364 YGAHLNRIGPKLLFNTGILTTGTCAILFGLLDRVEGHVPFITLSFVIRIVEAMGNAAFLT 543
           +G ++  IG + +F  GI  TG  AILFG L+ +     F   S ++RI+EA+G+AAF+T
Sbjct: 280 FGKYIIFIGARTMFIVGIAVTGVTAILFGFLNFLPSGNTFFWFSVLVRILEAVGDAAFVT 339

Query: 544 ASFAIIARN 570
           +SFAI A++
Sbjct: 340 SSFAIAAKS 348



 Score = 33.1 bits (72), Expect = 0.28
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = +3

Query: 549 FCYNSQEFPXNVATMFASIXXFFGLGLIVGPTXXXXXXXXXXXXXPFAVXGSALFCAA 722
           F   ++ FP NVA +   +  F GLG   GP              PF V G  L  A+
Sbjct: 342 FAIAAKSFPKNVAFVVGILETFAGLGYTAGPVIGGFFYDIGGFQLPFLVLGIVLLVAS 399


>AF045642-13|AAC02585.1|  293|Caenorhabditis elegans Hypothetical
           protein C17H12.6 protein.
          Length = 293

 Score = 35.1 bits (77), Expect = 0.069
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -3

Query: 243 NCVTKISYPDNDYRQPLSLRKIKTHHKLISVQINK*MYT-INRNSXSAGNFYNKPNTFSD 67
           NCV  +  P   Y +      +K ++ LI+VQ  +  YT ++  S S  NFY  PNT + 
Sbjct: 53  NCVYNVKVPKMVYARVRLENGLKGYNDLITVQDQQGTYTRVSSRSPSVLNFYVFPNTTTT 112

Query: 66  VQQTT 52
            Q  T
Sbjct: 113 FQVVT 117


>Z81130-2|CAB03417.1|  463|Caenorhabditis elegans Hypothetical
           protein T23G11.3 protein.
          Length = 463

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -1

Query: 503 ITKLSVIKGTWPSTRSSKPNNI-AHVPVVNMPVLNSSFGPILLRWAP*MGL 354
           + +L++I GT+   +S  P  +   VP+++   L SS GP+L+   P  GL
Sbjct: 317 LMELAIINGTYRPMKSPNPARVMTAVPLLSPTPLRSS-GPVLMSPTPGSGL 366


>U20535-1|AAC46632.1|  463|Caenorhabditis elegans gld-1 protein.
          Length = 463

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -1

Query: 503 ITKLSVIKGTWPSTRSSKPNNI-AHVPVVNMPVLNSSFGPILLRWAP*MGL 354
           + +L++I GT+   +S  P  +   VP+++   L SS GP+L+   P  GL
Sbjct: 317 LMELAIINGTYRPMKSPNPARVMTAVPLLSPTPLRSS-GPVLMSPTPGSGL 366


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,811,315
Number of Sequences: 27780
Number of extensions: 320048
Number of successful extensions: 835
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)