Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I02
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       24   1.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   5.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   5.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   5.0  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   6.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   8.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   8.7  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 466 EGHVPFITLSFVIRIVEAMGNAAFL 540
           EGH+  I    V+ I+ A+GN   L
Sbjct: 35  EGHIVSIVFYSVLMIISAIGNTTVL 59


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 391 PKLLFNTGILTTGTCAILFGLLD 459
           P   FN+ +L     A++FG LD
Sbjct: 167 PYFFFNSEVLQKANHALIFGKLD 189


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 391 PKLLFNTGILTTGTCAILFGLLD 459
           P   FN+ +L     A++FG LD
Sbjct: 167 PYFFFNSEVLQKANHALIFGKLD 189


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 673 PXNPYSAPPRVGPTMRPKPKN 611
           P NP   PP  GP   P  +N
Sbjct: 39  PPNPSQGPPPGGPPGAPPSQN 59


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 733 VPLYXPYPXHXXLXPXAPXGP 795
           +P+  P P H    P  P GP
Sbjct: 342 IPVPVPVPIHCGNFPPRPMGP 362


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 361 IYGAHLNRIGPKLLFNTGILTTGTCAI 441
           I+G HLNR+G ++  +T    T  C I
Sbjct: 317 IFGHHLNRLGREI--STYFTFTRPCGI 341


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/18 (44%), Positives = 12/18 (66%), Gaps = 2/18 (11%)
 Frame = +3

Query: 525  KRRLPDCFFCY--NSQEF 572
            + RL DC+ CY  N ++F
Sbjct: 1062 RERLYDCYVCYSPNDEDF 1079


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 327 GLRVSG-VHCEPHLWSPSQQDRA 392
           G+R++   +  P  WSP+  DRA
Sbjct: 506 GIRLAAPFNASPTTWSPADLDRA 528


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,974
Number of Sequences: 438
Number of extensions: 4182
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)