Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_I01
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88175-3|AAB42280.1|  295|Caenorhabditis elegans Hypothetical pr...    32   0.63 
Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF036706-10|AAM97948.1|  633|Caenorhabditis elegans Hypothetical...    29   3.4  
AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z79605-1|CAB01904.1|  719|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U10413-2|AAA20090.1|  719|Caenorhabditis elegans lin-15A protein...    28   7.8  
U10411-1|AAA20087.1|  719|Caenorhabditis elegans lin-15A protein...    28   7.8  

>U88175-3|AAB42280.1|  295|Caenorhabditis elegans Hypothetical
           protein F21F3.3 protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 774 ILYYTSHDNQLWSFFQNFKHFCSIFRLTEY 685
           ++Y  +H+ +LW +F  +  F S+F  +E+
Sbjct: 92  LVYTVAHEGELWEYFSRYFLFLSVFHFSEF 121


>Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical
           protein C14C10.4 protein.
          Length = 1058

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 580 NKMYLRTYGKKIVSLATKGTRYEVVNELFTSHQNIIFGQPENAAKMFKILKKA 738
           N+M       KIV L     R ++ NE  T  +N++   PE A  + K+ K A
Sbjct: 632 NEMITLDMAAKIVQLLEDDPRVQLNNEELTDARNVLKSSPEKAELLGKLRKSA 684


>AF036706-10|AAM97948.1|  633|Caenorhabditis elegans Hypothetical
           protein T07A9.9b protein.
          Length = 633

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +1

Query: 607 KKIVSLATKGTRYEVVNELFTSHQNIIFGQPENAAKMFKILKKAPQLVVMAGVVQDRLLS 786
           KK   L     +Y++V E++  H    F  PE  +K+  +L++  +L+  AG  +  L S
Sbjct: 463 KKHYMLKNPDEKYDIVPEIWEGHNLADFVDPEIQSKLENLLRE-EELLEQAGEYESDLDS 521

Query: 787 KNE 795
            +E
Sbjct: 522 DDE 524


>AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical
           protein T07A9.9a protein.
          Length = 681

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +1

Query: 607 KKIVSLATKGTRYEVVNELFTSHQNIIFGQPENAAKMFKILKKAPQLVVMAGVVQDRLLS 786
           KK   L     +Y++V E++  H    F  PE  +K+  +L++  +L+  AG  +  L S
Sbjct: 463 KKHYMLKNPDEKYDIVPEIWEGHNLADFVDPEIQSKLENLLRE-EELLEQAGEYESDLDS 521

Query: 787 KNE 795
            +E
Sbjct: 522 DDE 524


>Z79605-1|CAB01904.1|  719|Caenorhabditis elegans Hypothetical
           protein ZK678.1 protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 295 RGKINIQRPRLPHFERQLLLDLSKPKYGPPKY--TLPDFLLCD 417
           R  I + R R PH  +Q+    S+PK+ PP +    P+ LL D
Sbjct: 670 RRMIKVVRNRNPHLAKQVAAAPSEPKHIPPTHMEKKPEELLMD 712


>U10413-2|AAA20090.1|  719|Caenorhabditis elegans lin-15A protein
           protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 295 RGKINIQRPRLPHFERQLLLDLSKPKYGPPKY--TLPDFLLCD 417
           R  I + R R PH  +Q+    S+PK+ PP +    P+ LL D
Sbjct: 670 RRMIKVVRNRNPHLAKQVAAAPSEPKHIPPTHMEKKPEELLMD 712


>U10411-1|AAA20087.1|  719|Caenorhabditis elegans lin-15A protein
           protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 295 RGKINIQRPRLPHFERQLLLDLSKPKYGPPKY--TLPDFLLCD 417
           R  I + R R PH  +Q+    S+PK+ PP +    P+ LL D
Sbjct: 670 RRMIKVVRNRNPHLAKQVAAAPSEPKHIPPTHMEKKPEELLMD 712


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,791,285
Number of Sequences: 27780
Number of extensions: 426731
Number of successful extensions: 1168
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)