Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_H20
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0725 - 20442988-20443180,20443268-20443540,20443642-204438...    31   1.6  
05_01_0289 + 2265440-2266229,2267148-2267236                           29   3.8  

>08_02_0725 -
           20442988-20443180,20443268-20443540,20443642-20443853,
           20443935-20444247,20444334-20444441,20444537-20444643,
           20444743-20444781
          Length = 414

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 317 TTFTKKSLVALSQSPEDLPSPHFPVPSDKVVNIAE 213
           TTF +++  A S +PE+LP P   +  D+VV + +
Sbjct: 233 TTFRRRTTAAASPAPEELPLPRKILDHDRVVLLGD 267


>05_01_0289 + 2265440-2266229,2267148-2267236
          Length = 292

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/31 (54%), Positives = 19/31 (61%)
 Frame = +2

Query: 185 SQFSRSVRHPRRYSRLCHLGQGNGGREGLRD 277
           S FSR VR  +R SRL   G G GG  G+RD
Sbjct: 42  SSFSREVR--KRVSRLSVEGGGGGGGGGVRD 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,947,810
Number of Sequences: 37544
Number of extensions: 449867
Number of successful extensions: 1232
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)