Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_H19
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 33 0.21
U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450... 32 0.65
U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop heli... 31 1.1
U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop heli... 31 1.1
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 1.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 1.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 1.1
Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical p... 29 4.5
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 6.0
AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenase... 29 6.0
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 422 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTSTN 598
+ + FN +LK NLP +EG + LK T P++ +K+ E S +PV + T+ N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368
Query: 599 VSREEMEFT 625
V ++ T
Sbjct: 369 VEDDDSSST 377
>U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450
family protein 14A5 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 542 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 438
AF + G F R R P L HP G VFSS D
Sbjct: 82 AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116
>U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop helix
protein 27 protein.
Length = 321
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = -3
Query: 651 QRPRTXLSVVNSISSRLTFVEVVSVGSATGLLLSSGCFCFSGKVIFNTSFS*TQLPSEFT 472
++P+T + V + RLTF EV ++T LL+ C FN + +PS F+
Sbjct: 232 EKPKTRMEV-KDLFPRLTFQEVQESPTSTSPLLTFPCIPMIPTTQFNVLSNYNTVPSIFS 290
Query: 471 SQGRFCI 451
+ RF +
Sbjct: 291 APLRFIL 297
>U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop helix
protein 25 protein.
Length = 313
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = -3
Query: 651 QRPRTXLSVVNSISSRLTFVEVVSVGSATGLLLSSGCFCFSGKVIFNTSFS*TQLPSEFT 472
++P+T + V + RLTF EV ++T LL+ C FN + +PS F+
Sbjct: 224 EKPKTRMEV-KDLFPRLTFQEVQESPTSTSPLLTFPCIPMIPTTQFNVLSNYNTVPSIFS 282
Query: 471 SQGRFCI 451
+ RF +
Sbjct: 283 APLRFIL 289
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 479 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 610
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 500 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 610
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 479 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 610
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 500 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 610
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 479 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 610
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 500 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 610
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical
protein T05G5.12 protein.
Length = 92
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2
Query: 428 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSR 607
S F Y K+++ D + ++ Y+K T P+ QK + S A T ST S
Sbjct: 5 SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSSS 64
Query: 608 EEMEFTTES 634
+ + +S
Sbjct: 65 KRYTSSQQS 73
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 530 LKQKQPEDSKRPVAEPTETTSTNVSRE 610
LK+K+P S +PV++P+ T V +E
Sbjct: 239 LKKKEPSTSVKPVSDPSPTKKVPVKKE 265
>AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenases,
short chain protein15 protein.
Length = 278
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/44 (22%), Positives = 27/44 (61%)
Frame = +2
Query: 98 LSVVRTAGGGLGRATDTTMARHIGRITITTPFSPYVRESMLDTH 229
++++ + G+GR+T +A+ ++T+T S ++E++ + H
Sbjct: 8 VAIITGSSSGIGRSTAVLLAQEGAKVTVTGRSSEKIQETVNEIH 51
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -3
Query: 639 TXLSVVNSISSRLTF---VEVVSVGSATGLLLSSGCFCFSGKVI 517
T +V+N + + + V+SV TGL+L G FC +G I
Sbjct: 445 TVSNVINDLGGQAGLWLGLSVISVVEMTGLMLVMGAFCVTGGAI 488
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,056,371
Number of Sequences: 27780
Number of extensions: 322256
Number of successful extensions: 1008
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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