Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_H16
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0834 - 28051067-28051381,28051675-28052120,28052330-280526...    33   0.40 
11_06_0671 + 26099292-26099491,26099589-26099622,26104787-261048...    31   1.2  
02_02_0468 + 10633992-10634064,10635998-10636130,10636244-106363...    29   5.0  
06_03_1024 - 26958473-26958661,26958750-26958815,26959234-269593...    28   8.7  

>03_05_0834 - 28051067-28051381,28051675-28052120,28052330-28052671,
            28053170-28053310,28053419-28053489,28053575-28053640,
            28053874-28054017,28054149-28054207,28054246-28054369,
            28054730-28054862,28055138-28055187,28055715-28055824,
            28057355-28057436,28057536-28057705,28057812-28058498,
            28058645-28058794,28058908-28059039,28059444-28059594,
            28060253-28060344,28062478-28062585
          Length = 1190

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 655  EELDXIIDLQHSKKCEREGFCDLVHDKNIILYHIGXELEL 774
            EE D ++ L H KK +REG    + D+N+   + G E+E+
Sbjct: 1076 EEEDDVLLLDHVKKLQREGQLGAIVDRNLSSNYDGQEVEM 1115


>11_06_0671 +
           26099292-26099491,26099589-26099622,26104787-26104813,
           26105557-26105642,26105735-26105783,26105969-26106018,
           26106692-26107185,26107379-26107539,26107808-26108017,
           26108100-26108292,26108367-26108444,26108555-26108649,
           26109158-26109280
          Length = 599

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
 Frame = +1

Query: 445 NNTERTIATAKAFVDAAFPDCNINVKYEKDLKKYDLTFNYFIHN--TTESYKRKVVEXIE 618
           N  E  +   KA +++  P    +V   K + K    F++  HN   T     K +   E
Sbjct: 303 NPVEVQVYRNKANINSDTPKLKDDVYRLKGISKKGTRFDWLKHNGINTVEDMLKALNKNE 362

Query: 619 EMLAKYKLXDAYEELDXIIDLQHSKKCEREGFCDL----VHDKNIILY 750
           + +            D    ++H++KC+ EG C+L    V +K+++L+
Sbjct: 363 KKIRTECFKLEKNSKDWKETVKHARKCDLEGNCNLKSYRVEEKHVVLF 410


>02_02_0468 +
           10633992-10634064,10635998-10636130,10636244-10636315,
           10637028-10637171,10637271-10637342,10637451-10637516,
           10637603-10637673,10637796-10637936,10638347-10638688,
           10638989-10639383,10639481-10639795
          Length = 607

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 655 EELDXIIDLQHSKKCEREGFCDLVHDKNIILYHIGXELEL 774
           EE D ++ L H KK +REG    + D+N+   +   E+E+
Sbjct: 493 EEEDDVLLLDHVKKLQREGQLGSIVDRNLNQNYDDEEVEM 532


>06_03_1024 -
           26958473-26958661,26958750-26958815,26959234-26959303,
           26959526-26959773,26959938-26960029,26960726-26960871,
           26961001-26961185,26961721-26961838,26961948-26962087
          Length = 417

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 250 RVSFSNHIDEYTNKIFPKWSKEPGLLTEKGALLEGYMGEYL 372
           RV+F   +  Y    F  W K+PGL T +G L+E ++G+++
Sbjct: 120 RVTFKIVLS-YHGGSFDGWQKQPGLNTVQG-LVEKHLGQFV 158


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,516,030
Number of Sequences: 37544
Number of extensions: 396996
Number of successful extensions: 880
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)