Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_H16
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81579-1|CAB04655.1|  376|Caenorhabditis elegans Hypothetical pr...    35   0.068
Z27079-8|CAA81595.2|  798|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z81029-4|CAB02700.1|  300|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z81579-1|CAB04655.1|  376|Caenorhabditis elegans Hypothetical
           protein R13H4.3 protein.
          Length = 376

 Score = 35.1 bits (77), Expect = 0.068
 Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
 Frame = +1

Query: 157 MLGGNFLFFIIIXAYGCLHLEQVLIFSRHNIRVSFSNHI--DEYTNKIFPKWSKEPGLLT 330
           ++ G  +F  +        LE V    RH  R         D+YT K    WS+  G LT
Sbjct: 2   LIQGLVIFLAVFNNIESRKLEFVQALWRHGDRAPLHLPYPNDQYTEKA---WSRGWGQLT 58

Query: 331 EKGALLEGYMGEYLTKWVIENQLLPGTCPDTETVLVYANNTERTIATAKAFVDAAFP 501
             G      +GE+     +++  +P      + V + +++++R + +A+AF+   +P
Sbjct: 59  SIGMQQLHELGEFFRHQYVDSSFIPSNF-SVKEVYLRSSDSDRALVSAQAFLYGLYP 114


>Z27079-8|CAA81595.2|  798|Caenorhabditis elegans Hypothetical
           protein T05G5.8 protein.
          Length = 798

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 340 ALLEGYMGEYLTKWVIENQLLPGTCPDTETVLVYANNTE 456
           A LEG + E   KW IE QL       +E V++YA+N E
Sbjct: 230 AALEGNVKENFVKWFIEQQL-------SEYVIIYADNEE 261


>Z81029-4|CAB02700.1|  300|Caenorhabditis elegans Hypothetical
           protein C01A2.5 protein.
          Length = 300

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +2

Query: 590 TNEKLSXKSRKCSPNINXQMPTKN*TXLSTYNTLKNAKEKDSAIWSTIRILYF 748
           T+EK + K RK + +I    PT + T    + T + AK K    W T   LY+
Sbjct: 250 TSEKKAEK-RKANTDIQSD-PTTSDTYKKLFTTCEAAKNKTEGHWVTYNPLYY 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,713,768
Number of Sequences: 27780
Number of extensions: 387218
Number of successful extensions: 988
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)