Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_H13
         (944 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC131611-1|AAI31612.1|  298|Homo sapiens keratin associated prot...    31   6.1  
AB076359-1|BAD01546.1|  298|Homo sapiens keratin associated prot...    31   6.1  
AB076348-1|BAD01535.1|  255|Homo sapiens keratin associated prot...    31   6.1  

>BC131611-1|AAI31612.1|  298|Homo sapiens keratin associated protein
           10-11 protein.
          Length = 298

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = -2

Query: 352 PTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGSHIPSSDGQHCXSRR*GCCCTVSP 188
           P +C S+P C  +C+ S C   SG  S C  S    S  Q         CCT SP
Sbjct: 49  PVSCVSSPCCQAACEPSAC--QSGCTSSCTPSCCQQSSCQ-------PACCTSSP 94


>AB076359-1|BAD01546.1|  298|Homo sapiens keratin associated protein
           protein.
          Length = 298

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = -2

Query: 352 PTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGSHIPSSDGQHCXSRR*GCCCTVSP 188
           P +C S+P C  +C+ S C   SG  S C  S    S  Q         CCT SP
Sbjct: 49  PVSCVSSPCCQAACEPSAC--QSGCTSSCTPSCCQQSSCQ-------PACCTSSP 94


>AB076348-1|BAD01535.1|  255|Homo sapiens keratin associated protein
           protein.
          Length = 255

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = -2

Query: 352 PTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGSHIPSSDGQHCXSRR*GCCCTVSP 188
           P +C S+P C  +C+ S C   SG  S C  S    S  Q         CCT SP
Sbjct: 49  PVSCVSSPCCQAACEPSAC--QSGCTSSCTPSCCQQSSCQ-------PACCTSSP 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,855,961
Number of Sequences: 237096
Number of extensions: 1688426
Number of successful extensions: 2689
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2689
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)