Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_H11
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    28   0.13 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    28   0.13 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    28   0.13 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       25   0.70 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   4.9  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   6.5  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +2

Query: 536 VGLSVTLLINFTYVFWIHYLYFTQGTWVYPFLDLMNWPTRILFCCTSSIIGV 691
           V L+V  L     V   +  Y   G W++       W T  + CCT+SI+ +
Sbjct: 76  VSLAVADLAVAILVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCTASILNL 127


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +2

Query: 536 VGLSVTLLINFTYVFWIHYLYFTQGTWVYPFLDLMNWPTRILFCCTSSIIGV 691
           V L+V  L     V   +  Y   G W++       W T  + CCT+SI+ +
Sbjct: 76  VSLAVADLAVAILVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCTASILNL 127


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +2

Query: 536 VGLSVTLLINFTYVFWIHYLYFTQGTWVYPFLDLMNWPTRILFCCTSSIIGV 691
           V L+V  L     V   +  Y   G W++       W T  + CCT+SI+ +
Sbjct: 76  VSLAVADLAVAILVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCTASILNL 127


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 14/62 (22%), Positives = 28/62 (45%)
 Frame = +1

Query: 88  LLYHLSVVLFNSYVIWYDQQYVEIPLPDGIKNMSFKARGIFLTFWCFALQTIYFGTAVLN 267
           +++HL     +  V WY Q       P     +++   G+ + +W   +  IY  T++L 
Sbjct: 173 IVFHLET---HPNVTWYSQCVTFNAFPTYTHEITYSLFGMIMMYWFPLVVIIYTYTSILL 229

Query: 268 DI 273
           +I
Sbjct: 230 EI 231


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 107  TDKWYKSIVDRLLSLSERNIKIL 39
            T +WYK   +++ + S RNI+IL
Sbjct: 1342 TREWYKGQGEQIRTDSTRNIQIL 1364


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 107  TDKWYKSIVDRLLSLSERNIKIL 39
            T +WYK   +++ + S RNI+IL
Sbjct: 1338 TREWYKGQGEQIRTDSTRNIQIL 1360


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +2

Query: 536 VGLSVTLLINFTYVFWIHYLYFTQGTWVYPFLDLMNWPTRILFCCTSSIIGV 691
           V L+V+ L     V  +  LY   G W +  +    W +  +  CT+SI+ +
Sbjct: 81  VSLAVSDLCVALLVMPMALLYEISGNWSFGTIMCDLWVSFDVLSCTASILNL 132


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 593 LYFTQGTWVYPFLDLMNWPTRILFCCTSSIIGV 691
           L  T GTW    +   +W +  +  CT+SI+ +
Sbjct: 97  LQLTGGTWELGPMLCDSWVSLDILLCTASILSL 129


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 552 HCLLILPTYFGFIT 593
           H L+ LPT F F+T
Sbjct: 326 HALITLPTIFWFLT 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,402
Number of Sequences: 438
Number of extensions: 5813
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)