Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_H08
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical pr...    31   1.1  

>U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical
           protein R03H10.1 protein.
          Length = 379

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = +3

Query: 147 KFVILLNVPILTRMSTLLEVCGPLSPPXTPALMENKVELXLKKIAAKRARESS-SPPXGL 323
           K + +LN+P+  +++  L++   L+P  +  L+   +   LKK+  KR +E+S   P   
Sbjct: 250 KSLAVLNIPL--KLAVDLQIVEVLTPLSSSPLLNGPIHEILKKLEGKREKENSGKSPLKK 307

Query: 324 VTPQPSDSEGEDEXRKRSRCELERXLXTTPPPEAXLQ 434
            T     S  +   +KR    + + +   PP +  L+
Sbjct: 308 KTSIRRVSSTKGGSKKRRSSLVTKKIQEVPPKDEPLE 344


>Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical
           protein F33H1.3 protein.
          Length = 359

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
 Frame = +3

Query: 234 PALMENKVELXLKKIAAKRA-RESSSPPXGLVTPQPSDSEGEDEXRKRSRCELERXLXTT 410
           PA+++ KVE  L     + A ++   PP GL  P  SDSE E+E       + +  L   
Sbjct: 159 PAMIKRKVEFQLPPRPVRVAGQKPPGPPCGLA-PNFSDSEEEEEEVHDDHYD-DIDLAPV 216

Query: 411 PPPE--AXLQALGXHAGPEXRHLQSRATXAPVRAXHXH 518
           P PE     Q +  + GP   +  S  T  P    H H
Sbjct: 217 PIPEFDNPYQPIHRNYGPPSSY-NSMPTRMPHHHHHHH 253


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,560,995
Number of Sequences: 27780
Number of extensions: 188597
Number of successful extensions: 463
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)