Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_H03
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392     30   2.9  
06_03_0803 + 24737115-24737366,24738921-24739004,24739152-247392...    28   8.9  

>07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392
          Length = 313

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +2

Query: 476 NSSTLCATRTETGLL--CSSRKAALSASXQKTENLKTCFLNLKQSFPTVESANNLSLVEK 649
           NSS+  ++   + LL   +S K++  A  QK     T  +   +   +  S+N+  LVE+
Sbjct: 189 NSSSTSSSWWSSSLLTAATSFKSSAEAGMQKLSTATTQAIQKAKDGISTSSSNSGDLVEQ 248

Query: 650 CAKVDEMTSCIVXSLEECSXTGHPAN 727
           C +     S +   +E C  + H +N
Sbjct: 249 CVQCPARFSTVGALIEHCEKS-HQSN 273


>06_03_0803 +
           24737115-24737366,24738921-24739004,24739152-24739255,
           24739321-24739445,24739549-24739707,24740120-24740237,
           24740317-24740851,24740948-24741042,24741153-24741431,
           24741478-24741592,24741669-24741855,24741934-24742490
          Length = 869

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 331 VHSTRFSRKYCDKSAQLKGCISSVLQGVRPCVGNEYANHI 450
           + STRFS KYC  S   KGC S+++   +  +G+  A  +
Sbjct: 568 ISSTRFSAKYC--SYFQKGCGSTMILPAKTILGSRDAPRV 605


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,574,071
Number of Sequences: 37544
Number of extensions: 444551
Number of successful extensions: 1087
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)