Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_H02
         (888 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    26   1.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   5.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   7.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.4  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   9.4  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +3

Query: 63  NVVVNSACC----LSDFGFDQLLLCAFGENLDPADDPKNIKRP*SELRLELHS*IFLKKF 230
           N+ +   CC    +++FG + +L C  G+N   A      KR   ++ LE  S   + +F
Sbjct: 406 NIYLVQNCCQLFFMTNFGINFILYCVSGQNFRKAIFGMFQKRSQRQINLEHTSGTQVTEF 465

Query: 231 SMSISKGTCTRSTT 272
            +  +     R+TT
Sbjct: 466 VLRSNGSKMRRNTT 479


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 301  NSNLTVEYHDVKTRGFDTIKII 366
            N NL+ +Y  VK    DT KI+
Sbjct: 1098 NQNLSADYRLVKAHDKDTFKIV 1119


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = +3

Query: 84  CCLSDFG--FDQLLLCAFGENLDPADDPK 164
           C L++ G  F++LLL    E+L+ +D+P+
Sbjct: 498 CLLNNAGKTFERLLLDRLNEHLEDSDNPQ 526


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -3

Query: 238 DIENFLRNIHECSSSRSSDQGLLMFFGSSAGSKFSPKAHSRS*SNPKSER 89
           DI++F  NIH+ + +R    G     G S   +    +H R  S   SER
Sbjct: 396 DIDDF--NIHDTTLARQPSVGGSRRRGGSTTDREKRLSHDRKPSYSSSER 443


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -3

Query: 238 DIENFLRNIHECSSSRSSDQGLLMFFGSSAGSKFSPKAHSRS*SNPKSER 89
           DI++F  NIH+ + +R    G     G S   +    +H R  S   SER
Sbjct: 397 DIDDF--NIHDTTLARQPSVGGSRRRGGSTTDREKRLSHDRKPSYSSSER 444


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,960
Number of Sequences: 2352
Number of extensions: 13670
Number of successful extensions: 67
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)