Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_H02
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09069-1|CAA70290.1|  152|Drosophila melanogaster acyl-carrier s...    30   3.7  
AJ000879-3|CAA04369.1|  152|Drosophila melanogaster mtAcyl carri...    30   3.7  
AE014134-2801|AAF53581.1|  308|Drosophila melanogaster CG6012-PA...    30   3.7  
AE014296-233|AAF47480.1|  152|Drosophila melanogaster CG9160-PA,...    30   4.9  
AE014296-2099|AAF49955.3|  106|Drosophila melanogaster CG10861-P...    29   8.6  

>Y09069-1|CAA70290.1|  152|Drosophila melanogaster acyl-carrier
           subunit of NADH:ubiquinoneoxidoreductase protein.
          Length = 152

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
 Frame = +1

Query: 127 LLERTWIRPMTQKTSKDPDPNFDLNCIREYFSRNS-QCQLVRGPVPDPLPLSYYRVDIPN 303
           ++ R  +  MT + S++    +    +R+Y ++     +L+   V   L L Y ++D   
Sbjct: 35  MMHRIAVPSMTSQLSQECRGRWQTQLVRKYSAKPPLSLKLINERVLLVLKL-YDKID--P 91

Query: 304 SNLTVEYHDVKTRGFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTIFKY 459
           S L VE H +   G D++  +E  +  + E      +  + KL  P  I KY
Sbjct: 92  SKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIPDSDAEKLLKPADIIKY 143


>AJ000879-3|CAA04369.1|  152|Drosophila melanogaster mtAcyl carrier
           subunit isoform 2 protein.
          Length = 152

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
 Frame = +1

Query: 127 LLERTWIRPMTQKTSKDPDPNFDLNCIREYFSRNS-QCQLVRGPVPDPLPLSYYRVDIPN 303
           ++ R  +  MT + S++    +    +R+Y ++     +L+   V   L L Y ++D   
Sbjct: 35  MMHRIAVPSMTSQLSQECRGRWQTQLVRKYSAKPPLSLKLINERVLLVLKL-YDKID--P 91

Query: 304 SNLTVEYHDVKTRGFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTIFKY 459
           S L VE H +   G D++  +E  +  + E      +  + KL  P  I KY
Sbjct: 92  SKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIPDSDAEKLLKPADIIKY 143


>AE014134-2801|AAF53581.1|  308|Drosophila melanogaster CG6012-PA
           protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 11/45 (24%), Positives = 29/45 (64%)
 Frame = +1

Query: 373 YINSKTEKLVLAAEVQSLKLASPKTIFKYNRKAKEPIVRSDALEV 507
           +I  +T  + ++  V ++ +A+PK++ KYN++  + I+ ++ + V
Sbjct: 118 HIEKETANIPISILVNNVGIATPKSLLKYNQEETQNIIDTNVVAV 162


>AE014296-233|AAF47480.1|  152|Drosophila melanogaster CG9160-PA,
           isoform A protein.
          Length = 152

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
 Frame = +1

Query: 127 LLERTWIRPMTQKTSKDPDPNFDLNCIREYFSRNS-QCQLVRGPVPDPLPLSYYRVDIPN 303
           ++ R  +  MT + S++    +    +R Y ++     +L+   V   L L Y ++D   
Sbjct: 35  MMHRIAVPSMTSQLSQECRGRWQTQLVRRYSAKPPLSLKLINERVLLVLKL-YDKID--P 91

Query: 304 SNLTVEYHDVKTRGFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTIFKY 459
           S L VE H +   G D++  +E  +  + E      +  + KL  P  I KY
Sbjct: 92  SKLNVESHFINDLGLDSLDHVEVIMAMEDEFGFEIPDSDAEKLLKPADIIKY 143


>AE014296-2099|AAF49955.3|  106|Drosophila melanogaster CG10861-PA
           protein.
          Length = 106

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
 Frame = +1

Query: 121 CVLLERTWIRPMTQKTSKDPDPNFDLNCIREYFSR----NSQCQLVRGPVPDPLPLSYYR 288
           C+LL  T   P+ +K +   DPN  +  I+ +  +    ++  Q+   P PD +  + Y 
Sbjct: 28  CILLNATGNVPIIKKRTWTVDPNKTVGWIQTFIHKFLKLDASEQITFAPAPDQIIKNLYE 87

Query: 289 VDIPNSNLTVEY 324
               N  L + Y
Sbjct: 88  CHGTNGKLVLYY 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,803,844
Number of Sequences: 53049
Number of extensions: 615400
Number of successful extensions: 1432
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)