Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_G22
         (996 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X59589-1|CAA42159.1|  395|Caenorhabditis elegans calreticulin pr...    50   3e-06
AF125963-7|AAD14746.1|  395|Caenorhabditis elegans Calreticulin ...    50   3e-06
U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    29   3.9  

>X59589-1|CAA42159.1|  395|Caenorhabditis elegans calreticulin
           protein.
          Length = 395

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 34/105 (32%), Positives = 47/105 (44%)
 Frame = +2

Query: 179 FEEKXPDDSXESXWVYSEXPRXEXGRXKLXAGXFXXDPEDDXGLKTSXDARXYALSRKXX 358
           F+E+  D S E  WV S+  + + G  KL AG F      D G++TS DA+ Y+ + K  
Sbjct: 19  FKEEFNDASWEKRWVQSKH-KDDFGAFKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKFD 77

Query: 359 TDSGXEGKPLXSPXXLSXHEQPHXLCEADXSRXXDCKLDHXDMHG 493
            D   +GK L     +  HEQ    C     +      D  D HG
Sbjct: 78  KDFSNKGKTLVIQYTVK-HEQGID-CGGGYVKVMRADADLGDFHG 120


>AF125963-7|AAD14746.1|  395|Caenorhabditis elegans Calreticulin
           protein 1 protein.
          Length = 395

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 34/105 (32%), Positives = 47/105 (44%)
 Frame = +2

Query: 179 FEEKXPDDSXESXWVYSEXPRXEXGRXKLXAGXFXXDPEDDXGLKTSXDARXYALSRKXX 358
           F+E+  D S E  WV S+  + + G  KL AG F      D G++TS DA+ Y+ + K  
Sbjct: 19  FKEEFNDASWEKRWVQSKH-KDDFGAFKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKFD 77

Query: 359 TDSGXEGKPLXSPXXLSXHEQPHXLCEADXSRXXDCKLDHXDMHG 493
            D   +GK L     +  HEQ    C     +      D  D HG
Sbjct: 78  KDFSNKGKTLVIQYTVK-HEQGID-CGGGYVKVMRADADLGDFHG 120


>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = -3

Query: 874 RAWGGVCXGXRKXGGXGHXXXLSGXGGRDXGPXXXXPGGKG 752
           R  GG   G R  GG G      G GGR  G      GG+G
Sbjct: 94  RGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRG 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,103,282
Number of Sequences: 27780
Number of extensions: 141064
Number of successful extensions: 137
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2605097262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)