Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_G21
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.67 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   4.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   6.2  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 376 LKTKLSEFIKGFRTDAVPRQPRPVNVDFDHQVPP 477
           +K  L + I GFR DAVP      N+  D   PP
Sbjct: 216 MKFWLDKGIDGFRIDAVPHLFESANISLDE--PP 247


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 13  YRLTXGHSLSFXQWISXLTEIN 78
           YRLT G  +    WI+ L E N
Sbjct: 411 YRLTAGTVVLLHTWIAGLNEEN 432


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 672 CIECGWLYKRKMGQ*LFYGY 731
           C+E  ++ KR++G  LF+ Y
Sbjct: 233 CLEVVFVLKRRLGYYLFHTY 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,235
Number of Sequences: 438
Number of extensions: 3926
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)