Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_G19
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0153 - 1172080-1172450,1172493-1172592,1173777-1174691           31   1.3  
11_01_0156 - 1290361-1290876,1291095-1291201,1292027-1292105,129...    31   1.3  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    29   5.1  
01_06_0641 - 30782235-30782423,30782498-30782605,30782848-307829...    29   6.8  

>12_01_0153 - 1172080-1172450,1172493-1172592,1173777-1174691
          Length = 461

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -1

Query: 710 AAARYPDGATISIRTNAVNFWLLLTRICSTYTPSFSTINRGGSLDCDVMAVSILST 543
           AA RYP G     + ++V +WL L  + S+  P  + +    S D DV+ V   ++
Sbjct: 134 AAPRYPGGLN---QQHSVEYWLTLDLLSSSSPPCGAAVRVADSRDADVVFVPFFAS 186


>11_01_0156 -
           1290361-1290876,1291095-1291201,1292027-1292105,
           1292609-1293523
          Length = 538

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -1

Query: 710 AAARYPDGATISIRTNAVNFWLLLTRICSTYTPSFSTINRGGSLDCDVMAVSILST 543
           AA RYP G     + ++V +WL L  + S+  P  + +    S D DV+ V   ++
Sbjct: 134 AAPRYPGGLN---QQHSVEYWLTLDLLSSSSPPCGAAVRVADSRDADVVFVPFFAS 186


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = +1

Query: 235 LELSGDDCHFTLAKSLFKNTKLIIAMHCDAAVPLNITYDWTPEMCSPEYLHYFEQRIVTC 414
           LEL      F LA+ + +  ++ +         LN  ++W  ++ S   L Y   R+V C
Sbjct: 159 LELLSGSLEFPLAEQVKRALQIPLPRTLKRVEALNFIFEWWKDVSSDINLDYTRDRVVEC 218


>01_06_0641 -
           30782235-30782423,30782498-30782605,30782848-30782959,
           30783429-30783526,30784249-30784336,30784780-30784875,
           30785101-30785171,30786003-30786075,30787023-30787324,
           30787418-30787503,30788024-30788084,30789386-30789688
          Length = 528

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 656 SQHSYESRWWRHLDIWPRQY 715
           SQ S   RWW+H+DI+ + Y
Sbjct: 366 SQFSKLRRWWKHIDIFRQPY 385


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,293,843
Number of Sequences: 37544
Number of extensions: 413276
Number of successful extensions: 848
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)