Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_G19
         (911 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14955| Best HMM Match : CTP_transf_3 (HMM E-Value=8)                30   3.0  
SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  

>SB_14955| Best HMM Match : CTP_transf_3 (HMM E-Value=8)
          Length = 437

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +1

Query: 418 DRLERTTRDVNASRS-YQAMSVQETRTCHSNSSLVFDGGKDQPVD 549
           D++ERT  +V  + S  +A  ++E +T     SLV DG  D+ +D
Sbjct: 50  DKVERTAHNVGFTDSELRARRIEERQTGSVMQSLVLDGNTDRTLD 94


>SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 988

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +1

Query: 481 QETRTC--HSNSSLVFDGGKDQPVDKIXTAITSQSKLPPL 594
           +ETRTC  +   +LV+  G+D+ +++  T +T   + PP+
Sbjct: 781 RETRTCMRYVRETLVYSAGRDEQLERETTLMTVTFRGPPV 820


>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2839

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 394  EQRIVTCTDRLERTTRDVNASRSYQAMSVQETRTCHSNSSLVFDGGKDQP 543
            EQR+    + +ER   ++  SR +Q +S  E     S SS   D  KD P
Sbjct: 2563 EQRLREEREEMERAKEELKRSRQHQEISAPEPERTASESS---DSVKDSP 2609


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,593,580
Number of Sequences: 59808
Number of extensions: 496940
Number of successful extensions: 929
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2633701421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)