Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_G11
(896 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0317 - 16328558-16328612,16328698-16328901,16329794-163300... 215 3e-56
01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419 210 1e-54
04_04_0446 - 25288154-25288863,25288949-25289135,25289331-25291061 31 1.6
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 29 6.6
03_06_0610 + 35052455-35053429,35054936-35055511 29 6.6
>11_04_0317 -
16328558-16328612,16328698-16328901,16329794-16330065,
16330152-16330220
Length = 199
Score = 215 bits (526), Expect = 3e-56
Identities = 102/130 (78%), Positives = 115/130 (88%), Gaps = 1/130 (0%)
Frame = +3
Query: 207 EIKLFGRWSCYDVQVSDMSLQDYISVKE-KYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 383
E+KLF RWS DVQV+D+SL DY++V K+A YLPH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 10 EVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFRKAQCPIVERLTN 69
Query: 384 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 563
SLMMHGRNNGKK+MAVRIVKHA EIIHLLT NP+QV+V AIINSGPRED+TRIG AG V
Sbjct: 70 SLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAGAV 129
Query: 564 RRQAVDVSPL 593
RRQAVD+SPL
Sbjct: 130 RRQAVDISPL 139
Score = 64.9 bits (151), Expect = 8e-11
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 589 PWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELXXCS*G 711
P RRVNQAI+LL TGARE+AFRNIKTIAEC+ADEL + G
Sbjct: 138 PLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKG 178
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +2
Query: 701 AAKGSSNSYAIKKKDELERVAKSNR 775
AAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 175 AAKGSSNSYAIKKKDEIERVAKANR 199
>01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419
Length = 200
Score = 210 bits (512), Expect = 1e-54
Identities = 99/129 (76%), Positives = 113/129 (87%), Gaps = 1/129 (0%)
Frame = +3
Query: 210 IKLFGRWSCYDVQVSDMSLQDYISVKE-KYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 386
+KLF WS DVQV+D+SL DY++V K+A YLPH+AGRY+ KRFRKAQCP+VERLTNS
Sbjct: 12 VKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERLTNS 71
Query: 387 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 566
LMMHGRNNGKK+MAVRIVKHA EIIHLLT NP+QV+V AIINSGPRED+TRIG AG VR
Sbjct: 72 LMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAGAVR 131
Query: 567 RQAVDVSPL 593
RQAVD+SPL
Sbjct: 132 RQAVDISPL 140
Score = 64.9 bits (151), Expect = 8e-11
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 589 PWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELXXCS*G 711
P RRVNQAI+LL TGARE+AFRNIKTIAEC+ADEL + G
Sbjct: 139 PLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKG 179
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +2
Query: 701 AAKGSSNSYAIKKKDELERVAKSNR 775
AAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 176 AAKGSSNSYAIKKKDEIERVAKANR 200
>04_04_0446 - 25288154-25288863,25288949-25289135,25289331-25291061
Length = 875
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/92 (25%), Positives = 39/92 (42%)
Frame = +3
Query: 150 EAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRY 329
+AGS+ V S + D+ E+K G + S S+ D +V E P S+ R
Sbjct: 578 DAGSIEVPVSSDCVSGDVDEVKSNGDLKSIHDETSPTSILD--TVFEDSNSNEPESSRRT 635
Query: 330 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLM 425
+ +CP ++ + S N+G L+
Sbjct: 636 SCTERVALRCPAIDSVARSFSWEDTNSGSPLL 667
>07_01_0077 +
566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 142 T*PRQAAWLWKPCLYHKPPTF 204
T P Q +WLW+ L H P F
Sbjct: 88 TDPSQCSWLWREVLKHNPDAF 108
>03_06_0610 + 35052455-35053429,35054936-35055511
Length = 516
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = -1
Query: 260 HIRDLHIVATPSAEKLDFR---NVGGLW*RHGFHN-HAACLGYVVIPVLLGHDWYFSITK 93
++ ++V TP A L F GGLW +G + AAC+ V++ V+ DW+ +
Sbjct: 418 NLLSFYLVGTPVAVTLAFGARVGFGGLW--YGLLSAQAACVALVLLAVVWRTDWHLEALR 475
Query: 92 *K 87
K
Sbjct: 476 AK 477
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,517,416
Number of Sequences: 37544
Number of extensions: 439867
Number of successful extensions: 995
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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