Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_G03
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0941 - 7423284-7423366,7423479-7423749,7423844-7423913,742...    29   4.7  
10_08_0874 - 21205506-21205685,21205825-21205998,21206114-212062...    29   6.2  
07_03_1584 + 27907345-27907357,27907693-27908039,27908202-279083...    29   6.2  
08_02_0087 + 12163706-12163757,12164877-12164961,12165039-121651...    28   8.1  

>01_01_0941 -
           7423284-7423366,7423479-7423749,7423844-7423913,
           7424034-7424329,7426097-7426642
          Length = 421

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 226 KLESPKTSGKYDTGQLILHKVFGYRG 303
           KLE PK+  K   G  ++ ++FGYRG
Sbjct: 384 KLELPKSFSKIAFGNGLIRRLFGYRG 409


>10_08_0874 -
           21205506-21205685,21205825-21205998,21206114-21206249,
           21206622-21206794,21207612-21207839
          Length = 296

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 670 AVHCPRDPAGVAEEXHLG*SSA-TCTGRRPKVLESP*YRSIW 792
           AV   RD AGVAEE H+   SA  CT +R      P Y ++W
Sbjct: 87  AVDISRDLAGVAEEVHVADRSAPACTCKR-----QPGYDNMW 123


>07_03_1584 +
           27907345-27907357,27907693-27908039,27908202-27908319,
           27908653-27908705,27908808-27908978,27909447-27909643,
           27909729-27909807,27909954-27909992,27910202-27910321,
           27910417-27910518,27910654-27910737,27910832-27911074,
           27911156-27911281,27911365-27911439,27911534-27911605,
           27911807-27911926,27912075-27912172,27912643-27912802,
           27912867-27912980,27913029-27913121,27913122-27913319,
           27913404-27913497,27914032-27914192
          Length = 958

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 418 KEVKGRTHTFYQVLIDTRDAPYIRAQTEAVTFLGNQE-SSRSLYAI-PGLDYVAHDD 582
           +E  GR   FYQ +I + D P  R   E   F+  Q   + S++AI P  D +A  D
Sbjct: 825 EEDGGRRSRFYQTVIGSDDEPPSRCTPEVANFIVKQHFDAPSMWAIFPLQDLLALKD 881


>08_02_0087 +
           12163706-12163757,12164877-12164961,12165039-12165107,
           12165757-12165869,12167570-12167681,12167784-12167927,
           12169222-12169396,12169482-12169595,12169734-12169775,
           12171093-12171193,12171515-12171623
          Length = 371

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 756 EGVRVTVIPFYMGSRESQNSAVYG 827
           +G  V V+P  +G+  SQN A+YG
Sbjct: 143 QGHNVKVVPILVGALNSQNEAMYG 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,993,851
Number of Sequences: 37544
Number of extensions: 428921
Number of successful extensions: 928
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)