Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_G03
         (847 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009265-1|AAH09265.1|  368|Homo sapiens polymerase (DNA-directe...   194   4e-49
BC000655-1|AAH00655.1|  368|Homo sapiens polymerase (DNA-directe...   194   4e-49
AF179891-1|AAK92018.1|  368|Homo sapiens putative DNA polymerase...   194   4e-49
Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.       32   3.0  
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt...    32   3.0  
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro...    32   3.0  
AC013451-1|AAF87081.1|  969|Homo sapiens LTBP-2 protein.               32   3.0  
AB209865-1|BAD93102.1| 1700|Homo sapiens latent transforming gro...    32   3.0  

>BC009265-1|AAH09265.1|  368|Homo sapiens polymerase (DNA-directed),
           delta interacting protein 2 protein.
          Length = 368

 Score =  194 bits (472), Expect = 4e-49
 Identities = 90/155 (58%), Positives = 117/155 (75%), Gaps = 2/155 (1%)
 Frame = +1

Query: 211 LAEVGKLESPKTSGKYDTGQLILHKVFGYRGVILFPWLARVYDRDATNKKESPDNSTSET 390
           L  VG  E PK +GKY+TGQL LH +FGYRGV+LFPW AR+YDRD  +   +P+ + +  
Sbjct: 62  LETVGVFEVPKQNGKYETGQLFLHSIFGYRGVVLFPWQARLYDRDVASA--APEKAENPA 119

Query: 391 SGDSLTNAGKEVKGRTHTFYQVLIDTRDAPYI--RAQTEAVTFLGNQESSRSLYAIPGLD 564
              S     KEVKG+THT+YQVLID RD P+I  R+QTEAVTFL N + SR+LYAIPGLD
Sbjct: 120 GHGS-----KEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLD 174

Query: 565 YVAHDDIIPYASVERVPLQHELFDKFLMHNPDKDP 669
           YV+H+DI+PY S ++VP+QHELF++FL+++  K P
Sbjct: 175 YVSHEDILPYTSTDQVPIQHELFERFLLYDQTKAP 209



 Score = 66.5 bits (155), Expect = 1e-10
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +3

Query: 720 WLELSDVHRXTTEGVRVTVIPFYMGSRESQNSAVY 824
           WLELSDVHR TTE +RVTVIPFYMG RE+QNS VY
Sbjct: 227 WLELSDVHRETTENIRVTVIPFYMGMREAQNSHVY 261


>BC000655-1|AAH00655.1|  368|Homo sapiens polymerase (DNA-directed),
           delta interacting protein 2 protein.
          Length = 368

 Score =  194 bits (472), Expect = 4e-49
 Identities = 90/155 (58%), Positives = 117/155 (75%), Gaps = 2/155 (1%)
 Frame = +1

Query: 211 LAEVGKLESPKTSGKYDTGQLILHKVFGYRGVILFPWLARVYDRDATNKKESPDNSTSET 390
           L  VG  E PK +GKY+TGQL LH +FGYRGV+LFPW AR+YDRD  +   +P+ + +  
Sbjct: 62  LETVGVFEVPKQNGKYETGQLFLHSIFGYRGVVLFPWQARLYDRDVASA--APEKAENPA 119

Query: 391 SGDSLTNAGKEVKGRTHTFYQVLIDTRDAPYI--RAQTEAVTFLGNQESSRSLYAIPGLD 564
              S     KEVKG+THT+YQVLID RD P+I  R+QTEAVTFL N + SR+LYAIPGLD
Sbjct: 120 GHGS-----KEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLD 174

Query: 565 YVAHDDIIPYASVERVPLQHELFDKFLMHNPDKDP 669
           YV+H+DI+PY S ++VP+QHELF++FL+++  K P
Sbjct: 175 YVSHEDILPYTSTDQVPIQHELFERFLLYDQTKAP 209



 Score = 66.5 bits (155), Expect = 1e-10
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +3

Query: 720 WLELSDVHRXTTEGVRVTVIPFYMGSRESQNSAVY 824
           WLELSDVHR TTE +RVTVIPFYMG RE+QNS VY
Sbjct: 227 WLELSDVHRETTENIRVTVIPFYMGMREAQNSHVY 261


>AF179891-1|AAK92018.1|  368|Homo sapiens putative DNA polymerase
           delta p38 subunit protein.
          Length = 368

 Score =  194 bits (472), Expect = 4e-49
 Identities = 90/155 (58%), Positives = 117/155 (75%), Gaps = 2/155 (1%)
 Frame = +1

Query: 211 LAEVGKLESPKTSGKYDTGQLILHKVFGYRGVILFPWLARVYDRDATNKKESPDNSTSET 390
           L  VG  E PK +GKY+TGQL LH +FGYRGV+LFPW AR+YDRD  +   +P+ + +  
Sbjct: 62  LETVGVFEVPKQNGKYETGQLFLHSIFGYRGVVLFPWQARLYDRDVASA--APEKAENPA 119

Query: 391 SGDSLTNAGKEVKGRTHTFYQVLIDTRDAPYI--RAQTEAVTFLGNQESSRSLYAIPGLD 564
              S     KEVKG+THT+YQVLID RD P+I  R+QTEAVTFL N + SR+LYAIPGLD
Sbjct: 120 GHGS-----KEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLD 174

Query: 565 YVAHDDIIPYASVERVPLQHELFDKFLMHNPDKDP 669
           YV+H+DI+PY S ++VP+QHELF++FL+++  K P
Sbjct: 175 YVSHEDILPYTSTDQVPIQHELFERFLLYDQTKAP 209



 Score = 66.5 bits (155), Expect = 1e-10
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +3

Query: 720 WLELSDVHRXTTEGVRVTVIPFYMGSRESQNSAVY 824
           WLELSDVHR TTE +RVTVIPFYMG RE+QNS VY
Sbjct: 227 WLELSDVHRETTENIRVTVIPFYMGMREAQNSHVY 261


>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
          Length = 1821

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 537 KPICDPRSRLCSSRRYYTLCLCRKGSPTARALR*IPNAQS**RSXRSLPKR 689
           KP+C+P  +   S     LC+CR G   AR    IP+ +   ++ R  P+R
Sbjct: 188 KPVCEPPCQNRGSCSRPQLCVCRSGFRGARCEEVIPDEEFDPQNSRLAPRR 238


>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
           factor-beta-binding protein-2 protein.
          Length = 1821

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 537 KPICDPRSRLCSSRRYYTLCLCRKGSPTARALR*IPNAQS**RSXRSLPKR 689
           KP+C+P  +   S     LC+CR G   AR    IP+ +   ++ R  P+R
Sbjct: 188 KPVCEPPCQNRGSCSRPQLCVCRSGFRGARCEEVIPDEEFDPQNSRLAPRR 238


>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
           factor beta binding protein 2 protein.
          Length = 1821

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 537 KPICDPRSRLCSSRRYYTLCLCRKGSPTARALR*IPNAQS**RSXRSLPKR 689
           KP+C+P  +   S     LC+CR G   AR    IP+ +   ++ R  P+R
Sbjct: 188 KPVCEPPCQNRGSCSRPQLCVCRSGFRGARCEEVIPDEEFDPQNSRLAPRR 238


>AC013451-1|AAF87081.1|  969|Homo sapiens LTBP-2 protein.
          Length = 969

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 537 KPICDPRSRLCSSRRYYTLCLCRKGSPTARALR*IPNAQS**RSXRSLPKR 689
           KP+C+P  +   S     LC+CR G   AR    IP+ +   ++ R  P+R
Sbjct: 188 KPVCEPPCQNRGSCSRPQLCVCRSGFRGARCEEVIPDEEFDPQNSRLAPRR 238


>AB209865-1|BAD93102.1| 1700|Homo sapiens latent transforming growth
           factor beta binding protein 2 variant protein.
          Length = 1700

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 537 KPICDPRSRLCSSRRYYTLCLCRKGSPTARALR*IPNAQS**RSXRSLPKR 689
           KP+C+P  +   S     LC+CR G   AR    IP+ +   ++ R  P+R
Sbjct: 67  KPVCEPPCQNRGSCSRPQLCVCRSGFRGARCEEVIPDEEFDPQNSRLAPRR 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,770,123
Number of Sequences: 237096
Number of extensions: 2315532
Number of successful extensions: 4159
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4153
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)