Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_F21
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0415 - 21080600-21080941,21081119-21081217,21085363-210854...    33   0.23 
03_05_0562 + 25648581-25648841,25650243-25650626                       29   5.0  
07_01_1103 + 10141766-10143583                                         29   6.6  
12_02_0890 + 24040981-24041125,24041264-24041317,24042675-240428...    28   8.7  
07_03_0342 + 16963528-16963598,16963668-16964235,16964350-169647...    28   8.7  

>05_04_0415 -
           21080600-21080941,21081119-21081217,21085363-21085455,
           21085802-21085855,21085943-21086044,21086449-21086523,
           21086662-21086784
          Length = 295

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -3

Query: 694 EQSHHVPKTIVSG--DFRSIQREKSKEIQPVVKSDDNNVSCDKILRSV 557
           E++  +PK+   G  D+RS + E  +E +   ++++    CDKILR V
Sbjct: 234 EEAQKIPKSFGDGYIDYRSDEEEMQEEEEGPEENEEEEDECDKILREV 281


>03_05_0562 + 25648581-25648841,25650243-25650626
          Length = 214

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 594 TTTFLVTRYSGPYRSASPDPNAKPPP*IKTNIGRPGF 484
           TTT   +  S P ++A P+P  KP P +   + +P F
Sbjct: 173 TTTGSPSSMSSPAKTAEPEPLCKPTPELDMVVDQPDF 209


>07_01_1103 + 10141766-10143583
          Length = 605

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -2

Query: 197 PDSGCATTLHDEGGDAAGLEDALTKPTXTE-ERKTAXXGHM 78
           PD GC+  +HD       L D +  P   E +R  A  G M
Sbjct: 433 PDQGCSVVMHDSSAVFTHLSDPIVLPEEEEADRPDAPAGTM 473


>12_02_0890 +
           24040981-24041125,24041264-24041317,24042675-24042872,
           24043367-24043635
          Length = 221

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 766 SAXARQGHVVRITSKGPGVPLHPTEQSHHVP 674
           S+    GH  R   +GP VP+    + HHVP
Sbjct: 6   SSMEEAGHCHRRPQRGPLVPVAAIAEDHHVP 36


>07_03_0342 +
           16963528-16963598,16963668-16964235,16964350-16964760,
           16964848-16965051,16968663-16969032,16972466-16972601,
           16972680-16972779,16972933-16973190,16973276-16973314,
           16973420-16973458
          Length = 731

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 187 PESGWVCGRSRRAEASTLYASFRGVPYAKQPVGXLRFKE 303
           P+   +CG   R + S L   F+ VP A++ +  L FKE
Sbjct: 21  PKERSICGVIGRQKFSILQDDFKLVPAAEKDIAWLTFKE 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,646,553
Number of Sequences: 37544
Number of extensions: 528896
Number of successful extensions: 1481
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1479
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)