Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_F18
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AF067613-4|AAU20845.1|  327|Caenorhabditis elegans Hypothetical ...    29   5.8  
AF040642-10|AAB94949.2|  576|Caenorhabditis elegans Hypothetical...    29   5.8  
Z72505-4|CAA96611.1|  347|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical
           protein F40E12.2 protein.
          Length = 1251

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/53 (35%), Positives = 31/53 (58%)
 Frame = +2

Query: 368 RLVDGIDKIKPILDSTDQSTKRLTIVCNMQNFWVTLIIDYENAITYYTDTRNQ 526
           +L DG+DKIK +L S    T   T+   +++F VT++   E  +++ T T NQ
Sbjct: 133 KLKDGLDKIK-VLQSLVDETNSKTLQYFVEDFEVTIL---EKLVSFETVTFNQ 181


>Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical
           protein F36G9.13 protein.
          Length = 917

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 680 YKDINDSVQIVLQKLNTLLTYMKPLGEA 763
           YK  N S  I+L+KLN L    KP G+A
Sbjct: 532 YKKDNSSEVIILKKLNALKDLSKPFGDA 559


>AF067613-4|AAU20845.1|  327|Caenorhabditis elegans Hypothetical
           protein F56D6.7 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = -1

Query: 508 VIRYSVFIIYNQCDP--KVLHVANDCQSFGALVGRVQNRFYFVYAVYKSEYVVPVLL 344
           VI Y   II+    P    +H  ND +   ALV  + N FY    +    YV+ VLL
Sbjct: 27  VIDYGTIIIFFAIFPFYVYVHKINDVKDREALVFPITNHFYKTVVLMIIGYVIVVLL 83


>AF040642-10|AAB94949.2|  576|Caenorhabditis elegans Hypothetical
           protein C50D2.1 protein.
          Length = 576

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +2

Query: 623 NARLINKRL--DSEQPVAKGLYKDINDSVQIVLQKLNTL 733
           +A +IN+RL  D+E P+A+G  ++I      +LQ +  L
Sbjct: 25  DASVINRRLRRDTEAPIARGFNREIRRKPPAILQLIGPL 63


>Z72505-4|CAA96611.1|  347|Caenorhabditis elegans Hypothetical
           protein C50C10.6 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +2

Query: 674 GLYKDINDSVQIVLQKLNTLLTYMKPLGEATYINGRNANILVYFLETVAXQDMKLRNENG 853
           G Y+ I+  ++IV  + NT+ +  K L  A  +     ++L+YF  ++A     L  E  
Sbjct: 224 GCYRWISHQLKIVETQSNTVKSLQKQLFYALVVQSAIPSVLMYFPISMAFIFPMLNIELN 283

Query: 854 VKLI*IGLS 880
           +K   IGL+
Sbjct: 284 LKYPFIGLT 292


>AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical
           protein C09D4.2 protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
 Frame = +2

Query: 236 NDQSIVDAMINSFN---NSLQISDRQQELMCLAQDEFGLQQDRDHVFRLVDGIDKIKPIL 406
           N+Q+IVD  +  FN   NS+ I +++ +++       G     +   RL + IDKI  I 
Sbjct: 23  NNQNIVDFSVKDFNKNINSIDILNKKWDIVSKYVKFNGNSSKLNGRLRLSEKIDKI--IF 80

Query: 407 DSTDQSTKRLTIVCNMQNFWVTLIIDYENAITYYTDTRNQKMDESLKQIV 556
              D    +  I+ ++ N   T        +T +TD+   K+  S KQ+V
Sbjct: 81  KLGDDGANQNEIIVSLGNRNTT-------HMTVHTDSYKMKVSTS-KQVV 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,792,272
Number of Sequences: 27780
Number of extensions: 389219
Number of successful extensions: 1003
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)