Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_F15
         (930 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical ...   211   5e-55
Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical pr...    84   2e-16
AC024796-10|AAK29896.1|  623|Caenorhabditis elegans Hypothetical...    29   3.6  
AF125455-2|AAP13747.2|  431|Caenorhabditis elegans Hypothetical ...    29   4.7  

>AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical
           protein Y37A1B.5 protein.
          Length = 471

 Score =  211 bits (516), Expect = 5e-55
 Identities = 104/204 (50%), Positives = 132/204 (64%), Gaps = 1/204 (0%)
 Frame = +3

Query: 111 MSCCKGPGYASPLDAFNNGPREELLYVVCVRPNK-NKQDYLATVDVDSKSATYGQVIHRT 287
           + C  GPGYASP DA   GPREE+L+V    PN  +  D + TVDV+ +S T+ QVI R 
Sbjct: 7   LKCHGGPGYASPADAIK-GPREEVLFVTA--PNAADGPDAIFTVDVNPESDTFCQVISRV 63

Query: 288 YTGVTGDELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVID 467
                GDE+HH+GWN CSSCHD    KR  LI+P L+S  +Y ++V  + RK  L   I+
Sbjct: 64  DVPHIGDEVHHTGWNACSSCHDKPTEKRSHLIVPCLNSDRIYIINVENE-RKIYLEHTIE 122

Query: 468 GSKMRSFNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHA 647
            SK+ S N SFPHT+HCLA G IMIST+G+ N    G+F+L+D KT E  GTW   +   
Sbjct: 123 PSKLHSLNLSFPHTSHCLADGNIMISTLGEANGTPSGNFLLLDGKTFEPKGTWPADEKTV 182

Query: 648 KFGYDFWYQPYHDVMISSEWGTRN 719
            F YDFWYQP  +VMIS+EWG+ N
Sbjct: 183 PFNYDFWYQPRRNVMISTEWGSPN 206


>Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical
           protein R11G10.2 protein.
          Length = 576

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
 Frame = +3

Query: 174 EELLYVVCVRPNKN-KQDYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGW-NVCSSC 347
           +EL  +VC   +   ++D +A VD+D  S T+  ++   +    GDE     W     S 
Sbjct: 89  DELFAIVCCPHSIGYERDKIALVDLDPTSETFCTILSEVHLTSNGDEPGRMNWAKSAESL 148

Query: 348 HDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRSFNCSFPHTTHCLAT 527
            +     R  +I+P ++S  +Y +    +  K  + K I   ++   + S P+    L  
Sbjct: 149 GEMNKFVRRNIIVPCMNSGKIYVI--AFENEKLWIEKEIRNDELIRKDVSCPYAVRSLPL 206

Query: 528 --GEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHAKFGYDFWYQPYHDVMISS 701
               + +ST+GD   NGKGDF+LID +T EV          + +G DF  QP H++MISS
Sbjct: 207 KGAPVHVSTLGDRFGNGKGDFILIDRRTWEVRK--KSEPTFSDYGGDFSLQPRHNLMISS 264

Query: 702 EWG 710
           EWG
Sbjct: 265 EWG 267


>AC024796-10|AAK29896.1|  623|Caenorhabditis elegans Hypothetical
           protein Y48G1C.7 protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = -1

Query: 201 ERRPRKEVLPSVHY*MRLMVTHXLVLYN---KT*LPKLNSQHNKQLAYRITER 52
           E R RK++   +    RL+V+H L++Y+   +  LP+++  + K+ A R T+R
Sbjct: 20  EPRLRKKIYYMMETESRLVVSHALIMYDYNQEGELPRMHGGYLKRFAKRATKR 72


>AF125455-2|AAP13747.2|  431|Caenorhabditis elegans Hypothetical
           protein Y48A5A.1 protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
 Frame = +3

Query: 444 PRLHKVIDGSKMRSFN-CSFPHTTHCLATGEIMISTMGDENENGKGD---FVLIDSKTLE 611
           P++HK    S +        P TTH    G  ++  M D  ++ +GD   F++      E
Sbjct: 79  PKMHKKEHFSNLDMITELLTPSTTHHQPHGNQLVEEMDDSEDDDEGDGSEFLVEQQPAAE 138

Query: 612 VTGTWTKGKNHAKFGYDFWYQPY 680
                + GK   KFGY F +  +
Sbjct: 139 PEEPKSDGKIE-KFGYGFGWSKF 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,933,508
Number of Sequences: 27780
Number of extensions: 407523
Number of successful extensions: 954
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)