Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_F12
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0292 - 17358129-17358213,17358462-17358541,17358627-173587...    31   1.6  
07_01_0307 - 2194796-2199274                                           30   2.8  
11_06_0720 - 26617665-26617781,26617851-26617924,26618218-266183...    29   6.5  
09_03_0006 + 11426346-11426420,11426733-11427452                       28   8.6  

>02_03_0292 -
           17358129-17358213,17358462-17358541,17358627-17358797,
           17359440-17359541,17360216-17360365,17360549-17360671,
           17360781-17360867,17361209-17361289,17362071-17362210,
           17363490-17363534,17365315-17365485,17365784-17365805
          Length = 418

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
 Frame = +1

Query: 385 SRGERYTQFKNHGPPXNANSFATGSELLRRLFNTYPDTKEYFKMV------RKLPEEEYS 546
           SRG     F +HG P + ++F     +++ L + + D   +  +V      R LP  E++
Sbjct: 90  SRGAHVDSFSSHGTPLHLSAFCQQDGVMKILLDHHADCYAWLNLVLTPPEHRVLPLIEHA 149

Query: 547 QNPQFKAHVINLMTSLNLAVN 609
           +   F   +  + T L +A+N
Sbjct: 150 ECGMFNKLLKPVFTPLIMALN 170


>07_01_0307 - 2194796-2199274
          Length = 1492

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 61  RIDRAARLHTQYQSNCIYFISKIRARKLVFNYKSHR 168
           RID   ++HT+ ++     +SK R RKL  N+K  R
Sbjct: 803 RIDNLEKVHTKEEAAEAKLLSKTRLRKLELNWKQGR 838


>11_06_0720 -
           26617665-26617781,26617851-26617924,26618218-26618331,
           26619375-26619399,26619564-26619620,26620273-26622888
          Length = 1000

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 400 YTQFKNHGPPXNANSFATGSELLRRLFNTYP 492
           Y Q +  G P NAN+FAT   L   L N  P
Sbjct: 133 YRQMRRDGVPCNANAFATVVSLCGSLENEVP 163


>09_03_0006 + 11426346-11426420,11426733-11427452
          Length = 264

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +2

Query: 47  AVPPHGSTAPRVST 88
           A+PPHG TAP VST
Sbjct: 141 ALPPHGETAPLVST 154


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,596,508
Number of Sequences: 37544
Number of extensions: 455369
Number of successful extensions: 1192
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)