Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_F12
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81509-4|CAB04152.2| 236|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z68115-1|CAA92164.1| 231|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z18264-1|CAA79148.1| 159|Caenorhabditis elegans ORF1 protein. 35 0.067
Z11115-16|CAA77458.2| 159|Caenorhabditis elegans Hypothetical p... 35 0.067
S66164-1|AAB28512.3| 159|Caenorhabditis elegans globin protein. 35 0.067
AF067609-9|AAP82661.1| 278|Caenorhabditis elegans Hypothetical ... 34 0.12
Z46792-1|CAA86764.1| 266|Caenorhabditis elegans Hypothetical pr... 33 0.27
CU457740-7|CAM36337.1| 363|Caenorhabditis elegans Hypothetical ... 29 3.3
U51997-2|AAG24069.1| 332|Caenorhabditis elegans Serpentine rece... 29 5.8
AC006807-6|AAK84620.2| 230|Caenorhabditis elegans Hypothetical ... 29 5.8
Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical pr... 28 7.7
AM085500-1|CAJ30198.1| 947|Caenorhabditis elegans autophagy pro... 28 7.7
AF101315-4|AAO25988.1| 719|Caenorhabditis elegans Hypothetical ... 28 7.7
AF101315-3|AAC69227.1| 880|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z81509-4|CAB04152.2| 236|Caenorhabditis elegans Hypothetical
protein F21A3.6 protein.
Length = 236
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/108 (19%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +1
Query: 454 GSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNLNQPEIV 633
G ++ RLF+ YP K + R +P+ + + H + L ++++ E +
Sbjct: 108 GLKIFVRLFSEYPRYKLIWPQFRAIPDSSLMNAVELRRHASVYLNGLGKIIDSMRDEEAL 167
Query: 634 AAMMTKLGESHRRRQIKEKNFHELKEVIVKLFIDV--LRLDDATLSAW 771
M+++ +H + ++ + + E ++++ + +LDD T AW
Sbjct: 168 GKSMSRIAVAHIKWNVQRNHVIHMIEPVLEVVKECNGYQLDDETRQAW 215
>Z68115-1|CAA92164.1| 231|Caenorhabditis elegans Hypothetical
protein F19H6.2 protein.
Length = 231
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +1
Query: 454 GSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNLNQPEIV 633
GS++ + PD K F + K+P +P+F+ H + +L+ + NL+ P +
Sbjct: 74 GSKIFFMVLTAQPDIKAIFGL-EKIPTGRLKYDPRFRQHALVYTKTLDFVIRNLDYPGKL 132
Query: 634 AAMMTKLGESH 666
LG+ H
Sbjct: 133 EVYFENLGKRH 143
>Z18264-1|CAA79148.1| 159|Caenorhabditis elegans ORF1 protein.
Length = 159
Score = 35.1 bits (77), Expect = 0.067
Identities = 22/112 (19%), Positives = 43/112 (38%)
Frame = +1
Query: 436 ANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNL 615
A + G+ R F +PD + YFK K ++ ++ +F ++ + +L N
Sbjct: 25 AQNIENGNAFYRYFFTNFPDLRVYFKGAEKYTADDVKKSERFDKQGQRILLACHLLANVY 84
Query: 616 NQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVKLFIDVLRLDDATLSAW 771
E+ + + HR ++ + V V L+D +AW
Sbjct: 85 TNEEVFKGYVRETINRHRIYKMDPALWMAFFTVFTGYLESVGCLNDQQKAAW 136
>Z11115-16|CAA77458.2| 159|Caenorhabditis elegans Hypothetical
protein ZK637.13 protein.
Length = 159
Score = 35.1 bits (77), Expect = 0.067
Identities = 22/112 (19%), Positives = 43/112 (38%)
Frame = +1
Query: 436 ANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNL 615
A + G+ R F +PD + YFK K ++ ++ +F ++ + +L N
Sbjct: 25 AQNIENGNAFYRYFFTNFPDLRVYFKGAEKYTADDVKKSERFDKQGQRILLACHLLANVY 84
Query: 616 NQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVKLFIDVLRLDDATLSAW 771
E+ + + HR ++ + V V L+D +AW
Sbjct: 85 TNEEVFKGYVRETINRHRIYKMDPALWMAFFTVFTGYLESVGCLNDQQKAAW 136
>S66164-1|AAB28512.3| 159|Caenorhabditis elegans globin protein.
Length = 159
Score = 35.1 bits (77), Expect = 0.067
Identities = 22/112 (19%), Positives = 43/112 (38%)
Frame = +1
Query: 436 ANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNL 615
A + G+ R F +PD + YFK K ++ ++ +F ++ + +L N
Sbjct: 25 AQNIENGNAFYRYFFTNFPDLRVYFKGAEKYTADDVKKSERFDKQGQRILLACHLLANVY 84
Query: 616 NQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVKLFIDVLRLDDATLSAW 771
E+ + + HR ++ + V V L+D +AW
Sbjct: 85 TNEEVFKGYVRETINRHRIYKMDPALWMAFFTVFTGYLESVGCLNDQQKAAW 136
>AF067609-9|AAP82661.1| 278|Caenorhabditis elegans Hypothetical
protein C23H5.2 protein.
Length = 278
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +1
Query: 451 TGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNLNQPEI 630
T + +FN PDT++ F ++ ++ + + H + M L V L+ PE
Sbjct: 29 TAYNIFEMIFNQSPDTRQLFPFMK---FNTGGRSKEIEFHALRFMQVLESVVKTLDNPET 85
Query: 631 VAAMMTKLGESHRR 672
+ + LG H R
Sbjct: 86 LNPLCDNLGRVHGR 99
>Z46792-1|CAA86764.1| 266|Caenorhabditis elegans Hypothetical
protein C52A11.2 protein.
Length = 266
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +1
Query: 490 PDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNLNQPEIVAA---MMTKLGE 660
PD K+ F V + P + P+F H++ + + L E + ++ K G
Sbjct: 67 PDLKKVFG-VDRAPRAAMLKMPKFGGHILRFYEFMEQLTSMLGTSENLTGAWQLVRKTGR 125
Query: 661 SHRRRQIKEKNFHELK----EVIVKLFIDVL 741
SH R+ E+N ++++ E+++ +FI+ L
Sbjct: 126 SHVRQGFLEQNQNQMEKNYFEIVINVFIERL 156
>CU457740-7|CAM36337.1| 363|Caenorhabditis elegans Hypothetical
protein C50E10.7 protein.
Length = 363
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 185 LIYSKSYVSQGSLLVN---TLICDVKTVLPDRVAGSTTEIH*NNKSNHGHLV*LHVVGW 352
+IYS SY+ +G+LL+ T+I + TV+ + +TT H N L+ + ++ W
Sbjct: 18 IIYSDSYIYKGALLIEALLTVIVLIFTVISGFIILTTTAFH----KNFNSLIAIVILSW 72
>U51997-2|AAG24069.1| 332|Caenorhabditis elegans Serpentine
receptor, class h protein19 protein.
Length = 332
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +1
Query: 82 LHTQYQSNCIYFISKIRARKLVFNYKSHRRG---DQFTYIFKVLCIT 213
+HT Y + Y+ R + +FNYK+H+ + Y+ + L IT
Sbjct: 103 IHTLYMTEIFYY----RYQSCIFNYKTHKFSYFVKSYVYLIRTLIIT 145
>AC006807-6|AAK84620.2| 230|Caenorhabditis elegans Hypothetical
protein Y58A7A.6 protein.
Length = 230
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 475 LFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNL 615
+ +T D F++ P N FK+H NL LNL V NL
Sbjct: 123 ILHTDEDILRLFRLDHVAPNR-LKDNDYFKSHASNLALVLNLVVTNL 168
>Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical
protein C41G7.4 protein.
Length = 407
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 469 RRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHV 573
RRL +T + +Y K ++KL EE+ +P+ K +V
Sbjct: 257 RRLLDTMKFSDDYKKFLKKLSYEEFFIDPKAKGNV 291
>AM085500-1|CAJ30198.1| 947|Caenorhabditis elegans autophagy
protein 9 protein.
Length = 947
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 379 PGSRGERYTQFKNHGPPXNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQ 558
P + E++T NHGPP + A+ S+L R ++ + E+F + EY QN
Sbjct: 101 PETHYEQFTATHNHGPP----TMASSSQLNSRRWDHVLNLDEFFTHI-----YEYHQNGG 151
Query: 559 FKAHVINLMTSL 594
+ V+ + SL
Sbjct: 152 YLCIVLQKVFSL 163
>AF101315-4|AAO25988.1| 719|Caenorhabditis elegans Hypothetical
protein T22H9.2b protein.
Length = 719
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 379 PGSRGERYTQFKNHGPPXNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQ 558
P + E++T NHGPP + A+ S+L R ++ + E+F + EY QN
Sbjct: 101 PETHYEQFTATHNHGPP----TMASSSQLNSRRWDHVLNLDEFFTHI-----YEYHQNGG 151
Query: 559 FKAHVINLMTSL 594
+ V+ + SL
Sbjct: 152 YLCIVLQKVFSL 163
>AF101315-3|AAC69227.1| 880|Caenorhabditis elegans Hypothetical
protein T22H9.2a protein.
Length = 880
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 379 PGSRGERYTQFKNHGPPXNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQ 558
P + E++T NHGPP + A+ S+L R ++ + E+F + EY QN
Sbjct: 101 PETHYEQFTATHNHGPP----TMASSSQLNSRRWDHVLNLDEFFTHI-----YEYHQNGG 151
Query: 559 FKAHVINLMTSL 594
+ V+ + SL
Sbjct: 152 YLCIVLQKVFSL 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,229,371
Number of Sequences: 27780
Number of extensions: 403378
Number of successful extensions: 1114
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -