Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP25_F_F11
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 207 9e-54
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 34 0.12
U41033-6|AAA82378.1| 859|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 207 bits (505), Expect = 9e-54
Identities = 93/150 (62%), Positives = 119/150 (79%)
Frame = +2
Query: 122 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 301
M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60
Query: 302 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 481
+RKA++ HL NP+LEKLLPHI NVGFVFT+ DL E+R KLLEN+ APA+ GAIAP
Sbjct: 61 IRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCD 120
Query: 482 VVIPAHNTGLGPEKTSFFQGSFYPYQDFKG 571
V +P NTG+GPEKTSFFQ P + +G
Sbjct: 121 VKLPPQNTGMGPEKTSFFQALQIPTKIARG 150
Score = 87.0 bits (206), Expect = 2e-17
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +3
Query: 477 CQSSFPPTTPASVQRRPLSSRALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 656
C PP + +AL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML
Sbjct: 119 CDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNML 178
Query: 657 NISPFSYGL 683
++PFSYGL
Sbjct: 179 GVTPFSYGL 187
Score = 61.3 bits (142), Expect = 9e-10
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = +1
Query: 682 LXVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYQLL 825
L V+QVYD GT++ PE+LD+ E+LR +F +GV NVA++SLA+ Y L
Sbjct: 187 LVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTL 234
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 46.8 bits (106), Expect = 2e-05
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Frame = +2
Query: 110 TLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMG 289
+L+++ ++ K T K+N ++ +D+Y FI N+ S + IR + +S G
Sbjct: 11 SLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFG 69
Query: 290 KNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPG 463
KN ++ A+ + A L K +KG G +FT EV + E + AR G
Sbjct: 70 KNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVG 129
Query: 464 AIAPLSVVIP 493
+A +VV+P
Sbjct: 130 DVATETVVLP 139
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 34.3 bits (75), Expect = 0.12
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 243 SRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVT 422
S + RY+ P + T+ TT TT P+ T+RAT +P T+ R T
Sbjct: 256 STTTQRYIEPTT-QRPTTRRATTKRITTTTTAAPTTPRLTTARAT----TPLATTSRPTT 310
Query: 423 NCWRT-KSKLQLVLVPLPHCQSSFPPTTPASVQRRPLS 533
T ++ L PL ++ PP+ P +RP++
Sbjct: 311 PSPTTPRATTPLATTPLATTRAPLPPSPPPRTSKRPVT 348
>U41033-6|AAA82378.1| 859|Caenorhabditis elegans Hypothetical
protein K09E3.7 protein.
Length = 859
Score = 31.1 bits (67), Expect = 1.1
Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +3
Query: 369 RATLASCSPAETSLRSVTNCWRTKSKL----QLVLVPLPHCQSSFPPTTPASVQRRPLSS 536
R L S P T R +N +S+ Q +PL S PPT PA + P +S
Sbjct: 626 RGNLTSNGPIPTQFRG-SNMEAKQSRFPVWNQHPAMPLSLPTQSTPPTIPAFIPTIPSTS 684
Query: 537 RALSIPTKISKGTIEIINDVHILKPGDKVGASEATL 644
S+P G I N H + PGD A+ TL
Sbjct: 685 ---SMP-----GIISFPNTRHTIAPGDVAPANSLTL 712
>Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical
protein T06E6.10 protein.
Length = 249
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/56 (23%), Positives = 21/56 (37%)
Frame = +3
Query: 270 PVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT 437
P C+ + C T ++P+ C H + T CSP + C+ T
Sbjct: 109 PAGCAMVRPSGCMDSPTMTGCELKPT--CIHVNACTTTKCSPGKKCALHTVQCFTT 162
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 486 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 376
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,766,545
Number of Sequences: 27780
Number of extensions: 457028
Number of successful extensions: 1421
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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