Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_F09
         (929 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O00401 Cluster: Neural Wiskott-Aldrich syndrome protein...    35   3.4  
UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA...    34   4.5  
UniRef50_UPI0000E494ED Cluster: PREDICTED: similar to FIP1 like ...    33   7.9  
UniRef50_A7RXK9 Cluster: Predicted protein; n=2; Nematostella ve...    33   7.9  

>UniRef50_O00401 Cluster: Neural Wiskott-Aldrich syndrome protein;
           n=39; Eukaryota|Rep: Neural Wiskott-Aldrich syndrome
           protein - Homo sapiens (Human)
          Length = 505

 Score = 34.7 bits (76), Expect = 3.4
 Identities = 19/55 (34%), Positives = 21/55 (38%)
 Frame = +1

Query: 739 P*APPPXXXXSKIPPXXFKGGGTPXXXX*KIXXXFPLGXPPSGXXXFSPPPPXXR 903
           P  PPP    S  PP   +G G P     +     P   PPS      PPPP  R
Sbjct: 287 PPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNR 341


>UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to CG33556-PA - Strongylocentrotus purpuratus
          Length = 1472

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 25/84 (29%), Positives = 26/84 (30%)
 Frame = +1

Query: 559 PPPXNPXPPXXXXGXGXPXPQRGXXXFXPNXGXYPXXKPFNQXAXXXXXXXXXXLXLXFS 738
           PPP  P PP    G   P P        P  G  P   P               L     
Sbjct: 437 PPPPPPPPPPLPGGSCIPPPPP-----PPGMGGAPPPPP--PPPFPGGVPPPPPLPGGAP 489

Query: 739 P*APPPXXXXSKIPPXXFKGGGTP 810
           P  PPP      +PP  F GGG P
Sbjct: 490 PPPPPPPFPGGGVPPPPFPGGGPP 513


>UniRef50_UPI0000E494ED Cluster: PREDICTED: similar to FIP1 like 1
           (S. cerevisiae); n=2; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to FIP1 like 1 (S. cerevisiae) -
           Strongylocentrotus purpuratus
          Length = 841

 Score = 33.5 bits (73), Expect = 7.9
 Identities = 28/98 (28%), Positives = 31/98 (31%)
 Frame = +2

Query: 464 PXPGGXXXXFXXLKXPPXPXXXGXXFWGXXPFPPP*TPXPRXXGXGXGXXXPKGGNXVXP 643
           P  GG       +  PP P        G    PPP    P   G G G   P GG     
Sbjct: 460 PQSGGPPMSGPPMSGPPPPM-------GMHGGPPPPNMGPPPMGMGRGPRPPMGGPPPMM 512

Query: 644 QTRGXTPXKNLLTKXPXKXQNPXKGPFXWXFXHRPPPP 757
             +G  P        P     P  GP      +RPPPP
Sbjct: 513 GMQGPPPRMG-GPPPPGPHGPPPMGPPPGGNWNRPPPP 549


>UniRef50_A7RXK9 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 534

 Score = 33.5 bits (73), Expect = 7.9
 Identities = 32/118 (27%), Positives = 37/118 (31%), Gaps = 3/118 (2%)
 Frame = +1

Query: 559 PPPXNPXPPXXXXGXGXPXPQRGXXXFXP--NXGXYPXXKPFNQXAXXXXXXXXXXLXLX 732
           PP     PP    G   P P RG     P    G  P   P ++ +              
Sbjct: 310 PPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPP 369

Query: 733 FSP*APPPXXXXSKIPPXXFKGGGTPXXXX*KIXXXFPL-GXPPSGXXXFSPPPPXXR 903
               APPP    +  PP     GG P           P+ G PPS      PPPP  R
Sbjct: 370 SMGMAPPPVGGAAPPPPPPPPVGGPPPPPP-------PIEGRPPSSLGNPPPPPPPGR 420


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,566,242
Number of Sequences: 1657284
Number of extensions: 9063394
Number of successful extensions: 18473
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16295
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85670899699
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)