Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_F09
         (929 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   4.0  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   7.0  
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    28   9.2  
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542...    28   9.2  

>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 23/89 (25%), Positives = 24/89 (26%)
 Frame = +1

Query: 517 PXGXGXXFLGPXXVPPPXNPXPPXXXXGXGXPXPQRGXXXFXPNXGXYPXXKPFNQXAXX 696
           P G    FL P   PPP  P P       G   PQ+      P     P   P       
Sbjct: 44  PQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNS 103

Query: 697 XXXXXXXXLXLXFSP*APPPXXXXSKIPP 783
                         P APPP       PP
Sbjct: 104 SQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/43 (32%), Positives = 15/43 (34%)
 Frame = +1

Query: 547 PXXVPPPXNPXPPXXXXGXGXPXPQRGXXXFXPNXGXYPXXKP 675
           P   PPP    PP    G   P P +G     P  G  P   P
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP 368


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -2

Query: 607 PXPPTXXPGARGLXGGERXXAPKTXPXXPGGGXXF 503
           P PP   P   G+       AP+  P  PGGG  +
Sbjct: 715 PEPPVYAPYPPGITPSPPEYAPEPPPGPPGGGGGY 749


>03_02_0071 +
           5425722-5427154,5427259-5427464,5428445-5428686,
           5428788-5429570
          Length = 887

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 17/53 (32%), Positives = 20/53 (37%)
 Frame = +1

Query: 736 SP*APPPXXXXSKIPPXXFKGGGTPXXXX*KIXXXFPLGXPPSGXXXFSPPPP 894
           +P APPP       P   F  G TP     ++    P    PS      PPPP
Sbjct: 306 APPAPPPARSRRTPPRTRFSTGSTPDTK--QVTSPSPRPVQPSNAPPPPPPPP 356


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,834,015
Number of Sequences: 37544
Number of extensions: 362822
Number of successful extensions: 981
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)