Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_F06
         (879 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XVW5 Cluster: Putative uncharacterized protein; n=1; ...    34   5.5  
UniRef50_Q932N5 Cluster: Putative uncharacterized protein SAVP01...    33   9.6  
UniRef50_Q8PV73 Cluster: Heteropolysaccharide repeat unit export...    33   9.6  

>UniRef50_Q4XVW5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 92

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = -3

Query: 355 SISFKILQNAY-FGFINLIR*IIVVIYKAM*QFLPSFKAYIARAIINYNYLKNQQI 191
           +I F    NA+ + +I  I  I+V+IY  +  F PS+  YI   II +NY+KN ++
Sbjct: 11  NILFNFWGNAHIYIYIKRINTILVLIYFFL-MFFPSWLIYIYIYIILFNYIKNNKL 65


>UniRef50_Q932N5 Cluster: Putative uncharacterized protein SAVP010;
           n=1; Staphylococcus aureus subsp. aureus Mu50|Rep:
           Putative uncharacterized protein SAVP010 -
           Staphylococcus aureus (strain Mu50 / ATCC 700699)
          Length = 303

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = -3

Query: 310 NLIR*IIVVIYKAM*QFLPSFKAYIARAIINYNYLKNQQICTLYRHYEFTQPFRYI-NST 134
           N+I  +I+   K+M Q  P  K+++++  + Y Y     I   +  Y+FT PF +  N T
Sbjct: 155 NIIMNVIIDFNKSMIQSFPEMKSFLSKETVTYYYFSTNGI---WETYDFT-PFLFDGNKT 210

Query: 133 LII 125
           L++
Sbjct: 211 LLV 213


>UniRef50_Q8PV73 Cluster: Heteropolysaccharide repeat unit export
           protein; n=1; Methanosarcina mazei|Rep:
           Heteropolysaccharide repeat unit export protein -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 486

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +1

Query: 22  RLIGNPLRFKLLESLNVYILRLFVCEIADSPSPDILLM*NLCNEMVV*IHNVY 180
           +LIGN +  K++ S+  YIL +F+  I   P   I+ +      +++ I N+Y
Sbjct: 89  KLIGNAIIIKIILSVLAYILAVFIINIMGYPQETIIAVQIAAVSLLIDIFNIY 141


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,299,327
Number of Sequences: 1657284
Number of extensions: 8359560
Number of successful extensions: 15444
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15440
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)