Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_F06
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   1.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   4.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   4.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   4.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.7  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 209 IIVIYNCSCDVSLERRQKLLHGFINYYNDLPNQVY 313
           ++++++ + +VS  R + L   F N+YND   Q Y
Sbjct: 10  LLLMFSYTDNVSSTRTKYLRTNFPNFYNDFEVQRY 44


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 333 CRILKEIDETSSKIVVNLXVADI 401
           CR+ K +DE  S IV+    +D+
Sbjct: 277 CRLCKRVDEEISYIVLMSFASDL 299


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 333 CRILKEIDETSSKIVVNLXVADI 401
           CR+ K +DE  S IV+    +D+
Sbjct: 277 CRLCKRVDEEISYIVLMSFASDL 299


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 333 CRILKEIDETSSKIVVNLXVADI 401
           CR+ K +DE  S IV+    +D+
Sbjct: 277 CRLCKRVDEEISYIVLMSFASDL 299


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
 Frame = -3

Query: 391 TXKLTTILLEVSSISFKILQNAYFGFINLIR*IIVVIYKAM*QFLPSF--KAYIARAIIN 218
           T   T+ILL+VSS+      + Y G + +   I    +      L  F  K      IIN
Sbjct: 65  TDLATSILLKVSSLLIGFCASIYVGTVWINTSINGTKFIEFINKLIEFDVKLQNVSLIIN 124

Query: 217 YNYLKNQQICTLYRHYEFTQPFRYINSTLIIYRATGYLQFRTQIASIY 74
           Y   + +    L+  Y F   +   +  +   +   Y Q  + ++ I+
Sbjct: 125 YENQRTRSRIHLFVRYVFVTSYLLFDYFVQRNQEYKYYQILSHLSGIF 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,108
Number of Sequences: 336
Number of extensions: 2356
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)