Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_F04
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   4.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   8.6  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   8.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   8.6  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 574 LTEDHTVYKVTEEGNKKVAVDGA 642
           LTE + VYKV   G+  + V GA
Sbjct: 459 LTERNRVYKVETIGDAYMVVSGA 481


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 750 ANDFLHPIFGH 718
           +ND +HP++GH
Sbjct: 270 SNDKVHPLYGH 280


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 403 HQAFSWPYRFCIDKG 359
           HQ FS+P R  + KG
Sbjct: 616 HQIFSFPARLSLPKG 630


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 379 GTATKMLDDGTSSTASIDDSKLAFF 453
           GTA +++DD      ++DD  +  F
Sbjct: 38  GTAQQIIDDINEGKINMDDENVLLF 62


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +2

Query: 35  GXPLRF*YQYPKHRRYKDEIYGYYSSSLSWRPVSCAALRPLTMRTR 172
           G PL + Y      R +  IYG+  + +++R +  A +  L   TR
Sbjct: 368 GFPLEYEYVLAVSNRIQKVIYGFDFNDVNFR-ILIANVNDLIKNTR 412


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,690
Number of Sequences: 438
Number of extensions: 4355
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)